Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RNA5SP184-201ENST00000411071 108 ntBASIC1.5□□□□□ -2.17
CCL20P78556 VN1R51P-201ENST00000411675 945 ntBASIC1.5□□□□□ -2.17
CCL20P78556 AL357078.2-201ENST00000416486 427 ntBASIC1.5□□□□□ -2.17
CCL20P78556 AC027644.1-201ENST00000419595 298 ntBASIC1.5□□□□□ -2.17
CCL20P78556 RPL23AP83-201ENST00000434984 473 ntBASIC1.5□□□□□ -2.17
CCL20P78556 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.5□□□□□ -2.17
CCL20P78556 UBE2D3P1-201ENST00000436669 444 ntBASIC1.5□□□□□ -2.17
CCL20P78556 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.5□□□□□ -2.17
CCL20P78556 RPS27AP10-201ENST00000496103 208 ntBASIC1.5□□□□□ -2.17
CCL20P78556 SNORA31.23-201ENST00000517219 133 ntBASIC1.5□□□□□ -2.17
CCL20P78556 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.5□□□□□ -2.17
CCL20P78556 SNRPGP18-201ENST00000553000 214 ntBASIC1.5□□□□□ -2.17
CCL20P78556 CYCSP2-201ENST00000558168 301 ntBASIC1.5□□□□□ -2.17
CCL20P78556 AC024614.2-201ENST00000577584 372 ntBASIC1.5□□□□□ -2.17
CCL20P78556 AL451007.1-201ENST00000595491 289 ntBASIC1.5□□□□□ -2.17
CCL20P78556 AL391813.1-201ENST00000603098 260 ntBASIC1.5□□□□□ -2.17
CCL20P78556 AC010378.1-201ENST00000619270 362 ntBASIC1.5□□□□□ -2.17
CCL20P78556 AL356266.1-201ENST00000623311 483 ntBASIC1.5□□□□□ -2.17
CCL20P78556 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.5□□□□□ -2.17
CCL20P78556 PISRT1-201ENST00000626175 531 ntBASIC1.5□□□□□ -2.17
CCL20P78556 MKKS-204ENST00000639674 192 ntBASIC1.5□□□□□ -2.17
CCL20P78556 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.5□□□□□ -2.17
CCL20P78556 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CCL20P78556 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CCL20P78556 AC110491.1-201ENST00000562191 2010 ntBASIC1.49□□□□□ -2.17
CCL20P78556 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 SNORA16.1-201ENST00000364597 132 ntBASIC1.49□□□□□ -2.17
CCL20P78556 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CCL20P78556 RPS4XP8-201ENST00000402039 771 ntBASIC1.49□□□□□ -2.17
CCL20P78556 SNORA11.4-201ENST00000408823 129 ntBASIC1.49□□□□□ -2.17
CCL20P78556 EIF1AXP1-201ENST00000419267 435 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AL139413.1-201ENST00000421309 217 ntBASIC1.49□□□□□ -2.17
CCL20P78556 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CCL20P78556 BX276092.3-201ENST00000424182 230 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 AC098831.1-201ENST00000440661 216 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 RPL7P49-201ENST00000471402 708 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 RN7SL432P-201ENST00000484057 298 ntBASIC1.49□□□□□ -2.17
CCL20P78556 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CCL20P78556 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.49□□□□□ -2.17
CCL20P78556 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.49□□□□□ -2.17
CCL20P78556 AC121161.1-201ENST00000510606 652 ntBASIC1.49□□□□□ -2.17
CCL20P78556 RNU2-19P-201ENST00000517288 84 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AC106782.4-201ENST00000568264 210 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.49□□□□□ -2.17
CCL20P78556 MIR4319-201ENST00000577285 85 ntBASIC1.49□□□□□ -2.17
CCL20P78556 MIR4287-201ENST00000579398 78 ntBASIC1.49□□□□□ -2.17
CCL20P78556 MIR4444-1-201ENST00000581696 74 ntBASIC1.49□□□□□ -2.17
CCL20P78556 MIR4444-2-201ENST00000584390 74 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.49□□□□□ -2.17
CCL20P78556 AL390208.1-201ENST00000605885 644 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AC026741.1-201ENST00000605892 482 ntBASIC1.49□□□□□ -2.17
CCL20P78556 AL138478.1-201ENST00000612252 832 ntBASIC1.49□□□□□ -2.17
CCL20P78556 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.49□□□□□ -2.17
CCL20P78556 ELF2P3-201ENST00000445099 1506 ntBASIC1.49□□□□□ -2.17
CCL20P78556 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCL20P78556 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.49□□□□□ -2.17
CCL20P78556 HSPA8P4-201ENST00000511877 1920 ntBASIC1.48□□□□□ -2.17
CCL20P78556 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CCL20P78556 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CCL20P78556 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CCL20P78556 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.48□□□□□ -2.17
CCL20P78556 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
CCL20P78556 SNORA23-201ENST00000365128 182 ntBASIC1.48□□□□□ -2.17
CCL20P78556 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CCL20P78556 MIR676-201ENST00000390702 67 ntBASIC1.48□□□□□ -2.17
CCL20P78556 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.48□□□□□ -2.17
CCL20P78556 USP9YP19-201ENST00000412165 485 ntBASIC1.48□□□□□ -2.17
CCL20P78556 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CCL20P78556 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.48□□□□□ -2.17
CCL20P78556 USP9YP13-201ENST00000417797 480 ntBASIC1.48□□□□□ -2.17
CCL20P78556 ZNF90P2-204ENST00000419323 1075 ntBASIC1.48□□□□□ -2.17
CCL20P78556 NUP35P1-201ENST00000422734 947 ntBASIC1.48□□□□□ -2.17
CCL20P78556 ZYG11AP1-201ENST00000430329 837 ntBASIC1.48□□□□□ -2.17
CCL20P78556 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.48□□□□□ -2.17
CCL20P78556 AC016691.1-201ENST00000441321 413 ntBASIC1.48□□□□□ -2.17
CCL20P78556 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL20P78556 AC104978.1-201ENST00000449387 391 ntBASIC1.48□□□□□ -2.17
CCL20P78556 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.48□□□□□ -2.17
CCL20P78556 PMCHL2-203ENST00000457791 237 ntBASIC1.48□□□□□ -2.17
CCL20P78556 RNA5SP233-201ENST00000459153 113 ntBASIC1.48□□□□□ -2.17
CCL20P78556 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL20P78556 AC008379.1-201ENST00000463655 464 ntBASIC1.48□□□□□ -2.17
CCL20P78556 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
CCL20P78556 HMGB1P36-201ENST00000487709 576 ntBASIC1.48□□□□□ -2.17
CCL20P78556 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CCL20P78556 RNU4-29P-201ENST00000515943 174 ntBASIC1.48□□□□□ -2.17
CCL20P78556 snoZ278.1-201ENST00000517059 112 ntBASIC1.48□□□□□ -2.17
CCL20P78556 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL20P78556 AC118273.2-201ENST00000532092 465 ntBASIC1.48□□□□□ -2.17
CCL20P78556 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL20P78556 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL20P78556 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL20P78556 MIR4419B-201ENST00000577260 68 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms