Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU1-45P-201ENST00000517191 141 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 RPL7P20-201ENST00000520308 745 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 AC135001.1-201ENST00000544546 283 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX6-1P78426 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX6-1P78426 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX6-1P78426 TRAV28-201ENST00000557548 323 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 MIR4286-201ENST00000580651 93 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX6-1P78426 AC092747.3-201ENST00000603769 301 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 AC113403.1-201ENST00000604910 193 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 AC010201.1-201ENST00000605051 540 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 uc_338.13-201ENST00000618243 179 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 AC009248.2-201ENST00000619826 254 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX6-1P78426 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.8□□□□□ -1.8
NKX6-1P78426 AC090740.1-201ENST00000623193 2262 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NKX6-1P78426 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX6-1P78426 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX6-1P78426 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX6-1P78426 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NKX6-1P78426 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX6-1P78426 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX6-1P78426 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX6-1P78426 HSPA8P4-201ENST00000511877 1920 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX6-1P78426 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 AC016588.2-201ENST00000632484 3021 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 FAM35BP-202ENST00000497389 3337 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX6-1P78426 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 RNA5SP307-201ENST00000362863 116 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 RNA5SP283-201ENST00000365604 119 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 Y_RNA.378-201ENST00000365652 113 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 SNORA11F-201ENST00000408237 128 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 RN7SKP32-201ENST00000410167 303 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 SNORA74C-2-201ENST00000411179 201 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 RNA5SP39-201ENST00000411245 120 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 POLHP1-201ENST00000411806 470 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AC063979.1-201ENST00000415539 377 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX6-1P78426 RPL23AP25-201ENST00000430973 463 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AL365400.1-201ENST00000431854 640 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 IFNA20P-201ENST00000436840 528 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 RPL21P41-201ENST00000459863 264 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 KC877373.1-201ENST00000479066 408 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AL132838.2-201ENST00000492041 314 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 RPL30P5-201ENST00000494923 336 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AC146944.2-203ENST00000502493 354 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 MTCO3P9-201ENST00000506989 781 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 CCDC34P1-201ENST00000507441 517 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AC079140.5-201ENST00000507882 310 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 HIGD1AP13-201ENST00000509878 289 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AC139495.1-202ENST00000513164 354 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 RNU6-189P-201ENST00000516120 101 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 RN7SKP256-201ENST00000517201 314 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX6-1P78426 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX6-1P78426 OR11H5P-201ENST00000554039 926 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AL118558.2-201ENST00000556294 238 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 ZNF192P1-203ENST00000565888 810 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 AC104985.2-201ENST00000620598 500 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 AL445363.3-201ENST00000623080 671 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX6-1P78426 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
NKX6-1P78426 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX6-1P78426 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX6-1P78426 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX6-1P78426 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX6-1P78426 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX6-1P78426 ZNF285B-201ENST00000561698 1767 ntBASIC3.79□□□□□ -1.8
NKX6-1P78426 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NKX6-1P78426 AL133383.2-201ENST00000622958 2336 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX6-1P78426 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
NKX6-1P78426 MIR331-201ENST00000362302 94 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 Y_RNA.166-201ENST00000363730 102 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 RNU6-522P-201ENST00000364497 107 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 SNORA4.3-201ENST00000365564 137 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 Y_RNA.399-201ENST00000383955 105 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 MIR513A2-201ENST00000385249 127 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 PTMAP2-201ENST00000397627 327 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 SNORA11.1-201ENST00000408133 129 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 RPL7P10-201ENST00000417407 739 ntBASIC3.78□□□□□ -1.8
NKX6-1P78426 TMEM167AP1-201ENST00000423409 219 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms