Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 FABP5P13-201ENST00000452144 328 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.91□□□□□ -1.94
CX3CL1P78423 RNU6-953P-201ENST00000459154 107 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 RPL37P6-201ENST00000460682 294 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 RPL9P33-201ENST00000484311 566 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 RPL32P34-201ENST00000486380 400 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 HMGN1P11-201ENST00000508668 303 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 AC026402.1-201ENST00000513642 170 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 RNU6-506P-201ENST00000516553 94 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 RNU6-1282P-201ENST00000516735 96 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 RNA5SP290-201ENST00000517133 127 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CL1P78423 OR4R1P-201ENST00000529879 463 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.91□□□□□ -1.94
CX3CL1P78423 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CX3CL1P78423 AL359212.1-201ENST00000556608 614 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 TGIF1P1-201ENST00000558095 802 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.91□□□□□ -1.94
CX3CL1P78423 DEFB131E-202ENST00000602581 683 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 AC107294.1-201ENST00000609524 467 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 AC130324.3-201ENST00000614165 542 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 AL359880.1-201ENST00000621879 266 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 PLCE1P1-201ENST00000622094 305 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 AC025034.2-201ENST00000623264 286 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 AC124864.2-201ENST00000624736 186 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 AC007256.1-201ENST00000392253 2765 ntBASIC2.91□□□□□ -1.94
CX3CL1P78423 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CX3CL1P78423 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CX3CL1P78423 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CX3CL1P78423 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CX3CL1P78423 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CX3CL1P78423 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
CX3CL1P78423 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CX3CL1P78423 SNORA62.1-201ENST00000364287 154 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 RNU6-512P-201ENST00000364438 103 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 Y_RNA.245-201ENST00000364493 95 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 U8.11-201ENST00000384699 133 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 U8.12-201ENST00000384701 133 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 MTCO3P40-201ENST00000392516 676 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC068050.1-201ENST00000394891 380 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 RPS4XP8-201ENST00000402039 771 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AL445189.1-201ENST00000405722 338 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 RPS12P24-201ENST00000412619 387 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AL109913.1-201ENST00000421173 514 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AL353193.1-201ENST00000421444 268 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.9□□□□□ -1.95
CX3CL1P78423 AL591212.2-201ENST00000433923 257 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 HSPD1P21-201ENST00000436541 245 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 SETP5-201ENST00000437270 562 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CX3CL1P78423 MTND4P25-201ENST00000441039 533 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 RPS24P13-201ENST00000442520 397 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 RPL21P133-201ENST00000443666 476 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 RNU6-420P-201ENST00000458780 107 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 U8.18-201ENST00000459285 133 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 APOOP4-201ENST00000513530 597 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AP001893.2-201ENST00000526949 202 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.9□□□□□ -1.95
CX3CL1P78423 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.9□□□□□ -1.95
CX3CL1P78423 AMZ2P1-203ENST00000565833 850 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.9□□□□□ -1.95
CX3CL1P78423 MIR4474-201ENST00000579189 78 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.9□□□□□ -1.95
CX3CL1P78423 KLKP1-201ENST00000595979 403 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC080078.2-201ENST00000603766 501 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC136601.2-201ENST00000604356 474 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC022893.3-201ENST00000607665 437 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 MIR8058-201ENST00000615737 89 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC068792.1-201ENST00000621354 417 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CL1P78423 AL732372.2-225ENST00000642124 456 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CX3CL1P78423 AC058791.1-201ENST00000608412 3198 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CL1P78423 AC007656.2-201ENST00000624902 4547 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 ZNF680P1-201ENST00000436625 1469 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CX3CL1P78423 MTND5P17-201ENST00000418405 1603 ntBASIC2.9□□□□□ -1.95
CX3CL1P78423 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.89□□□□□ -1.95
CX3CL1P78423 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CL1P78423 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CL1P78423 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CL1P78423 RNU6-1120P-201ENST00000362988 108 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 RNU4-48P-201ENST00000365559 182 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CX3CL1P78423 CALM2P3-201ENST00000400429 449 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AL356967.1-201ENST00000406305 431 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 RN7SKP202-201ENST00000410439 330 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 CYCSP19-201ENST00000411715 316 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AF274854.1-201ENST00000413236 615 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 UBE2V1P10-201ENST00000414685 269 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC007390.1-201ENST00000415722 356 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CL1P78423 AC006989.1-201ENST00000427212 131 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AL451062.2-201ENST00000427515 271 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AL592045.1-201ENST00000429867 352 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CL1P78423 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms