Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.56□□□□□ -1.84
RAE1P78406 FGF7P1-201ENST00000582820 288 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RNU6-89P-201ENST00000606519 100 ntBASIC3.56□□□□□ -1.84
RAE1P78406 uc_338.34-201ENST00000617467 174 ntBASIC3.56□□□□□ -1.84
RAE1P78406 AL357559.1-201ENST00000622228 274 ntBASIC3.56□□□□□ -1.84
RAE1P78406 AC244205.2-202ENST00000635781 342 ntBASIC3.56□□□□□ -1.84
RAE1P78406 MTND5P42-201ENST00000637720 498 ntBASIC3.56□□□□□ -1.84
RAE1P78406 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.56□□□□□ -1.84
RAE1P78406 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAE1P78406 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
RAE1P78406 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
RAE1P78406 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.55□□□□□ -1.84
RAE1P78406 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 RNU6-797P-201ENST00000363101 109 ntBASIC3.55□□□□□ -1.84
RAE1P78406 SNORA51.2-201ENST00000364595 132 ntBASIC3.55□□□□□ -1.84
RAE1P78406 RNU4-66P-201ENST00000365199 138 ntBASIC3.55□□□□□ -1.84
RAE1P78406 RNU6-767P-201ENST00000384132 107 ntBASIC3.55□□□□□ -1.84
RAE1P78406 MIR30B-201ENST00000384850 88 ntBASIC3.55□□□□□ -1.84
RAE1P78406 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RAE1P78406 RNU6-332P-201ENST00000391193 108 ntBASIC3.55□□□□□ -1.84
RAE1P78406 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 AL592114.1-201ENST00000403842 483 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AL162578.1-201ENST00000406202 378 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.55□□□□□ -1.84
RAE1P78406 RPL30P2-201ENST00000414021 291 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.55□□□□□ -1.84
RAE1P78406 ARL5AP1-201ENST00000418991 388 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.55□□□□□ -1.84
RAE1P78406 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.55□□□□□ -1.84
RAE1P78406 AL139247.1-201ENST00000422768 325 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.55□□□□□ -1.84
RAE1P78406 MTND4LP16-201ENST00000440828 295 ntBASIC3.55□□□□□ -1.84
RAE1P78406 TXNP1-201ENST00000441872 371 ntBASIC3.55□□□□□ -1.84
RAE1P78406 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.55□□□□□ -1.84
RAE1P78406 ELOCP23-201ENST00000452014 332 ntBASIC3.55□□□□□ -1.84
RAE1P78406 FABP5P13-201ENST00000452144 328 ntBASIC3.55□□□□□ -1.84
RAE1P78406 NUTF2P7-201ENST00000453086 375 ntBASIC3.55□□□□□ -1.84
RAE1P78406 MTND1P11-201ENST00000456661 876 ntBASIC3.55□□□□□ -1.84
RAE1P78406 RNU6-953P-201ENST00000459154 107 ntBASIC3.55□□□□□ -1.84
RAE1P78406 RPL21P99-201ENST00000480369 423 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AL049874.1-201ENST00000489560 388 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.55□□□□□ -1.84
RAE1P78406 RBBP4P6-201ENST00000508098 202 ntBASIC3.55□□□□□ -1.84
RAE1P78406 FTH1P9-201ENST00000513251 355 ntBASIC3.55□□□□□ -1.84
RAE1P78406 RNU6-927P-201ENST00000516199 100 ntBASIC3.55□□□□□ -1.84
RAE1P78406 MIR2114-201ENST00000516645 80 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.55□□□□□ -1.84
RAE1P78406 PSMA2P1-201ENST00000526365 646 ntBASIC3.55□□□□□ -1.84
RAE1P78406 HIGD1AP5-201ENST00000529959 259 ntBASIC3.55□□□□□ -1.84
RAE1P78406 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.55□□□□□ -1.84
RAE1P78406 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.55□□□□□ -1.84
RAE1P78406 PARP1P2-201ENST00000556806 195 ntBASIC3.55□□□□□ -1.84
RAE1P78406 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.55□□□□□ -1.84
RAE1P78406 AC087499.8-201ENST00000578406 226 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.55□□□□□ -1.84
RAE1P78406 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RAE1P78406 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.55□□□□□ -1.84
RAE1P78406 AC005261.5-201ENST00000596280 355 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AL390240.1-201ENST00000612950 384 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AL359547.2-201ENST00000615810 418 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AL136221.1-201ENST00000621449 509 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AC090617.10-201ENST00000624308 134 ntBASIC3.55□□□□□ -1.84
RAE1P78406 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.55□□□□□ -1.84
RAE1P78406 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.55□□□□□ -1.84
RAE1P78406 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.55□□□□□ -1.84
RAE1P78406 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.55□□□□□ -1.84
RAE1P78406 USP8P1-201ENST00000494673 3183 ntBASIC3.55□□□□□ -1.84
RAE1P78406 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAE1P78406 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.55□□□□□ -1.84
RAE1P78406 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
RAE1P78406 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
RAE1P78406 OR4G2P-202ENST00000641004 1759 ntBASIC3.54□□□□□ -1.84
RAE1P78406 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.54□□□□□ -1.84
RAE1P78406 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
RAE1P78406 RNA5SP502-201ENST00000362694 119 ntBASIC3.54□□□□□ -1.84
RAE1P78406 Y_RNA.166-201ENST00000363730 102 ntBASIC3.54□□□□□ -1.84
RAE1P78406 MIR1290-201ENST00000408735 78 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.54□□□□□ -1.84
RAE1P78406 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.54□□□□□ -1.84
RAE1P78406 AC245054.1-201ENST00000420944 258 ntBASIC3.54□□□□□ -1.84
RAE1P78406 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.54□□□□□ -1.84
RAE1P78406 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.54□□□□□ -1.84
RAE1P78406 RPL21P66-201ENST00000426566 466 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AC004975.1-201ENST00000428733 208 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.54□□□□□ -1.84
RAE1P78406 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms