Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 Z80107.1-201ENST00000436830 412 ntBASIC1.28□□□□□ -2.2
UBA52P62987 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.28□□□□□ -2.2
UBA52P62987 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.28□□□□□ -2.2
UBA52P62987 RNU7-23P-201ENST00000459465 62 ntBASIC1.28□□□□□ -2.2
UBA52P62987 OR52A4P-202ENST00000481634 799 ntBASIC1.28□□□□□ -2.2
UBA52P62987 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.28□□□□□ -2.2
UBA52P62987 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.28□□□□□ -2.2
UBA52P62987 MTCYBP23-201ENST00000558717 1102 ntBASIC1.28□□□□□ -2.2
UBA52P62987 LINC00933-203ENST00000559812 219 ntBASIC1.28□□□□□ -2.2
UBA52P62987 MIR5571-201ENST00000577998 113 ntBASIC1.28□□□□□ -2.2
UBA52P62987 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UBA52P62987 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
UBA52P62987 UBE2L2-201ENST00000254302 429 ntBASIC1.27□□□□□ -2.21
UBA52P62987 Y_RNA.116-201ENST00000363292 103 ntBASIC1.27□□□□□ -2.21
UBA52P62987 Y_RNA.796-201ENST00000364268 102 ntBASIC1.27□□□□□ -2.21
UBA52P62987 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
UBA52P62987 Y_RNA.799-201ENST00000364992 102 ntBASIC1.27□□□□□ -2.21
UBA52P62987 RNU1-148P-201ENST00000384472 162 ntBASIC1.27□□□□□ -2.21
UBA52P62987 MIR518E-201ENST00000385252 88 ntBASIC1.27□□□□□ -2.21
UBA52P62987 CISD1P1-201ENST00000393907 327 ntBASIC1.27□□□□□ -2.21
UBA52P62987 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.27□□□□□ -2.21
UBA52P62987 VN1R108P-201ENST00000431580 830 ntBASIC1.27□□□□□ -2.21
UBA52P62987 DNAJC19P4-201ENST00000440115 345 ntBASIC1.27□□□□□ -2.21
UBA52P62987 RPL21P134-201ENST00000453468 483 ntBASIC1.27□□□□□ -2.21
UBA52P62987 Z82190.1-201ENST00000454534 490 ntBASIC1.27□□□□□ -2.21
UBA52P62987 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.27□□□□□ -2.21
UBA52P62987 AC107032.1-201ENST00000485945 480 ntBASIC1.27□□□□□ -2.21
UBA52P62987 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.27□□□□□ -2.21
UBA52P62987 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
UBA52P62987 AC112518.2-201ENST00000508565 425 ntBASIC1.27□□□□□ -2.21
UBA52P62987 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.27□□□□□ -2.21
UBA52P62987 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
UBA52P62987 SCARNA11.3-201ENST00000517276 130 ntBASIC1.27□□□□□ -2.21
UBA52P62987 AC004923.2-201ENST00000529649 369 ntBASIC1.27□□□□□ -2.21
UBA52P62987 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
UBA52P62987 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.27□□□□□ -2.21
UBA52P62987 MED28P6-201ENST00000558776 231 ntBASIC1.27□□□□□ -2.21
UBA52P62987 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.27□□□□□ -2.21
UBA52P62987 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.27□□□□□ -2.21
UBA52P62987 DPRXP5-201ENST00000604662 539 ntBASIC1.27□□□□□ -2.21
UBA52P62987 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.27□□□□□ -2.21
UBA52P62987 NUP58P1-201ENST00000502546 1738 ntBASIC1.26□□□□□ -2.21
UBA52P62987 AC005539.1-201ENST00000443768 1479 ntBASIC1.26□□□□□ -2.21
UBA52P62987 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.26□□□□□ -2.21
UBA52P62987 Y_RNA.122-201ENST00000363331 96 ntBASIC1.26□□□□□ -2.21
UBA52P62987 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
UBA52P62987 Y_RNA.224-201ENST00000364308 111 ntBASIC1.26□□□□□ -2.21
UBA52P62987 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
UBA52P62987 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
UBA52P62987 RNU6-174P-201ENST00000410406 106 ntBASIC1.26□□□□□ -2.21
UBA52P62987 AC096920.1-201ENST00000423991 241 ntBASIC1.26□□□□□ -2.21
UBA52P62987 RPL23AP6-201ENST00000446637 472 ntBASIC1.26□□□□□ -2.21
UBA52P62987 AL137159.1-201ENST00000452808 512 ntBASIC1.26□□□□□ -2.21
UBA52P62987 AC027575.1-201ENST00000481064 460 ntBASIC1.26□□□□□ -2.21
UBA52P62987 MTCYBP35-201ENST00000503630 1137 ntBASIC1.26□□□□□ -2.21
UBA52P62987 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.26□□□□□ -2.21
UBA52P62987 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.26□□□□□ -2.21
UBA52P62987 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.26□□□□□ -2.21
UBA52P62987 RNU6-928P-201ENST00000516876 104 ntBASIC1.26□□□□□ -2.21
UBA52P62987 OR4P1P-201ENST00000530808 1136 ntBASIC1.26□□□□□ -2.21
UBA52P62987 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.26□□□□□ -2.21
UBA52P62987 AC015720.1-201ENST00000565251 277 ntBASIC1.26□□□□□ -2.21
UBA52P62987 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.26□□□□□ -2.21
UBA52P62987 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.26□□□□□ -2.21
UBA52P62987 AC011260.1-201ENST00000578420 472 ntBASIC1.26□□□□□ -2.21
UBA52P62987 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.26□□□□□ -2.21
UBA52P62987 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.26□□□□□ -2.21
UBA52P62987 AC012360.2-201ENST00000609349 391 ntBASIC1.26□□□□□ -2.21
UBA52P62987 AC011330.2-201ENST00000621680 635 ntBASIC1.26□□□□□ -2.21
UBA52P62987 TPTE2P4-201ENST00000258589 1605 ntBASIC1.26□□□□□ -2.21
UBA52P62987 ZNF209P-201ENST00000593450 2304 ntBASIC1.25□□□□□ -2.21
UBA52P62987 RNU6-707P-201ENST00000364647 95 ntBASIC1.25□□□□□ -2.21
UBA52P62987 RNU6-1074P-201ENST00000383995 104 ntBASIC1.25□□□□□ -2.21
UBA52P62987 PRRC2CP1-201ENST00000404428 159 ntBASIC1.25□□□□□ -2.21
UBA52P62987 OR9R1P-201ENST00000412200 877 ntBASIC1.25□□□□□ -2.21
UBA52P62987 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UBA52P62987 BX510359.4-201ENST00000423750 193 ntBASIC1.25□□□□□ -2.21
UBA52P62987 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.25□□□□□ -2.21
UBA52P62987 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.25□□□□□ -2.21
UBA52P62987 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.25□□□□□ -2.21
UBA52P62987 AC245517.4-201ENST00000448601 281 ntBASIC1.25□□□□□ -2.21
UBA52P62987 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.25□□□□□ -2.21
UBA52P62987 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.25□□□□□ -2.21
UBA52P62987 TOMM22P6-201ENST00000465035 409 ntBASIC1.25□□□□□ -2.21
UBA52P62987 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.25□□□□□ -2.21
UBA52P62987 RNF138P1-201ENST00000502765 546 ntBASIC1.25□□□□□ -2.21
UBA52P62987 PCNAP1-201ENST00000505363 709 ntBASIC1.25□□□□□ -2.21
UBA52P62987 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
UBA52P62987 AP001960.1-201ENST00000506494 658 ntBASIC1.25□□□□□ -2.21
UBA52P62987 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.25□□□□□ -2.21
UBA52P62987 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.25□□□□□ -2.21
UBA52P62987 SNORA48.10-201ENST00000516965 160 ntBASIC1.25□□□□□ -2.21
UBA52P62987 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
UBA52P62987 AC008562.1-201ENST00000521763 330 ntBASIC1.25□□□□□ -2.21
UBA52P62987 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.25□□□□□ -2.21
UBA52P62987 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.25□□□□□ -2.21
UBA52P62987 AL161670.1-201ENST00000554348 137 ntBASIC1.25□□□□□ -2.21
UBA52P62987 FAM60BP-201ENST00000578364 658 ntBASIC1.25□□□□□ -2.21
UBA52P62987 AC243960.4-201ENST00000600532 288 ntBASIC1.25□□□□□ -2.21
UBA52P62987 AL355877.2-201ENST00000603670 358 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms