Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC011451.2-201ENST00000604303 598 ntBASIC1.06□□□□□ -2.24
RPS28P62857 AC069304.2-201ENST00000605154 435 ntBASIC1.06□□□□□ -2.24
RPS28P62857 AF129408.1-201ENST00000608767 431 ntBASIC1.06□□□□□ -2.24
RPS28P62857 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.06□□□□□ -2.24
RPS28P62857 AC011939.3-201ENST00000613686 466 ntBASIC1.06□□□□□ -2.24
RPS28P62857 MIR6861-201ENST00000618657 64 ntBASIC1.06□□□□□ -2.24
RPS28P62857 U2.21-201ENST00000637295 81 ntBASIC1.06□□□□□ -2.24
RPS28P62857 U6.101-201ENST00000637707 76 ntBASIC1.06□□□□□ -2.24
RPS28P62857 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
RPS28P62857 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RPS28P62857 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.06□□□□□ -2.24
RPS28P62857 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.05□□□□□ -2.24
RPS28P62857 SNORD62.1-201ENST00000362541 86 ntBASIC1.05□□□□□ -2.24
RPS28P62857 RNU1-23P-201ENST00000363361 144 ntBASIC1.05□□□□□ -2.24
RPS28P62857 SNORA71.1-201ENST00000364523 117 ntBASIC1.05□□□□□ -2.24
RPS28P62857 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RPS28P62857 RNU1-57P-201ENST00000384491 166 ntBASIC1.05□□□□□ -2.24
RPS28P62857 MIR518D-201ENST00000385014 87 ntBASIC1.05□□□□□ -2.24
RPS28P62857 RPL22P22-201ENST00000395439 379 ntBASIC1.05□□□□□ -2.24
RPS28P62857 RPS4XP9-201ENST00000405151 780 ntBASIC1.05□□□□□ -2.24
RPS28P62857 MTATP6P27-201ENST00000416987 621 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS28P62857 Z93242.1-201ENST00000427102 353 ntBASIC1.05□□□□□ -2.24
RPS28P62857 NANOGP2-201ENST00000435391 727 ntBASIC1.05□□□□□ -2.24
RPS28P62857 USP9YP35-201ENST00000435696 412 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL353706.1-201ENST00000436728 494 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL772161.1-201ENST00000439130 476 ntBASIC1.05□□□□□ -2.24
RPS28P62857 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS28P62857 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.05□□□□□ -2.24
RPS28P62857 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS28P62857 FCF1P6-201ENST00000456841 595 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS28P62857 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS28P62857 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS28P62857 AC007991.1-201ENST00000522680 631 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.05□□□□□ -2.24
RPS28P62857 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS28P62857 MIR4419B-201ENST00000577260 68 ntBASIC1.05□□□□□ -2.24
RPS28P62857 MIR3176-201ENST00000582210 90 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.6-201ENST00000603753 252 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.11-201ENST00000604059 253 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.10-201ENST00000604330 253 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AC008162.1-201ENST00000604718 254 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.1-201ENST00000604752 252 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.2-201ENST00000604983 252 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.5-201ENST00000605253 252 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.4-201ENST00000605279 254 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.12-201ENST00000605291 253 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.8-201ENST00000605353 252 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.9-201ENST00000605428 253 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL670379.7-201ENST00000605823 252 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AC116312.1-201ENST00000606841 314 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AC107075.1-201ENST00000613695 314 ntBASIC1.05□□□□□ -2.24
RPS28P62857 MIR6132-201ENST00000622083 109 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AC080188.3-201ENST00000624842 748 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AC026634.1-201ENST00000634369 198 ntBASIC1.05□□□□□ -2.24
RPS28P62857 MIR4302-201ENST00000638058 60 ntBASIC1.05□□□□□ -2.24
RPS28P62857 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.05□□□□□ -2.24
RPS28P62857 MIR492-201ENST00000638676 116 ntBASIC1.05□□□□□ -2.24
RPS28P62857 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
RPS28P62857 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
RPS28P62857 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.05□□□□□ -2.24
RPS28P62857 CDC27P3-201ENST00000635418 1910 ntBASIC1.05□□□□□ -2.24
RPS28P62857 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
RPS28P62857 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RPS28P62857 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RPS28P62857 RNU1-62P-201ENST00000362599 164 ntBASIC1.04□□□□□ -2.24
RPS28P62857 RNU1-33P-201ENST00000364249 162 ntBASIC1.04□□□□□ -2.24
RPS28P62857 RNU1-39P-201ENST00000383897 165 ntBASIC1.04□□□□□ -2.24
RPS28P62857 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
RPS28P62857 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
RPS28P62857 RNU11-3P-201ENST00000391111 133 ntBASIC1.04□□□□□ -2.24
RPS28P62857 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RPS28P62857 AL109941.1-201ENST00000401925 229 ntBASIC1.04□□□□□ -2.24
RPS28P62857 CCNG1P1-201ENST00000406783 885 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AL133264.1-201ENST00000407157 562 ntBASIC1.04□□□□□ -2.24
RPS28P62857 RNU4-47P-201ENST00000410876 114 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AC007098.1-201ENST00000420122 367 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AL451054.2-201ENST00000420896 202 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.04□□□□□ -2.24
RPS28P62857 MTND4P24-201ENST00000424002 397 ntBASIC1.04□□□□□ -2.24
RPS28P62857 RAC1P8-201ENST00000427086 527 ntBASIC1.04□□□□□ -2.24
RPS28P62857 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.04□□□□□ -2.24
RPS28P62857 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.04□□□□□ -2.24
RPS28P62857 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC1.04□□□□□ -2.24
RPS28P62857 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.04□□□□□ -2.24
RPS28P62857 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AC007677.1-201ENST00000445757 515 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AC114755.5-201ENST00000447760 831 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AL590365.1-201ENST00000450788 243 ntBASIC1.04□□□□□ -2.24
RPS28P62857 MTND3P4-201ENST00000453537 303 ntBASIC1.04□□□□□ -2.24
RPS28P62857 BX322784.1-201ENST00000455793 1077 ntBASIC1.04□□□□□ -2.24
RPS28P62857 NDUFA12P1-201ENST00000455914 406 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AC005908.1-201ENST00000468701 347 ntBASIC1.04□□□□□ -2.24
RPS28P62857 RPL31P58-201ENST00000469001 379 ntBASIC1.04□□□□□ -2.24
RPS28P62857 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.04□□□□□ -2.24
RPS28P62857 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RPS28P62857 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.04□□□□□ -2.24
RPS28P62857 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms