Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.19□□□□□ -1.9
CLDN20P56880 AP006245.1-201ENST00000522549 120 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AC103843.2-201ENST00000530523 682 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AP003034.1-201ENST00000534621 422 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN20P56880 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN20P56880 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN20P56880 AC008739.3-201ENST00000603262 127 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN20P56880 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CLDN20P56880 AP001148.1-201ENST00000624124 2359 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN20P56880 OTUD4P1-201ENST00000237841 3067 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN20P56880 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CLDN20P56880 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN20P56880 AL672296.1-201ENST00000427780 2158 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 OR4G2P-202ENST00000641004 1759 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AL137003.2-201ENST00000606924 2538 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN20P56880 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN20P56880 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN20P56880 Y_RNA.159-201ENST00000363674 87 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 RPL17P50-201ENST00000396131 546 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 NDUFS5P1-201ENST00000405668 289 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 RN7SKP140-201ENST00000411196 284 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AC126124.2-201ENST00000413542 321 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 UBE2V1P10-201ENST00000414685 269 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 MTATP6P18-201ENST00000417994 673 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AC068533.1-201ENST00000418542 415 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 ZNF90P2-204ENST00000419323 1075 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN20P56880 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN20P56880 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN20P56880 AL356867.1-201ENST00000429623 299 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 RPL36AP6-201ENST00000435770 321 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN20P56880 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN20P56880 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN20P56880 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN20P56880 AC093899.1-201ENST00000457984 376 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AC084357.1-201ENST00000473404 255 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN20P56880 RN7SKP258-201ENST00000517151 304 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 NRON-201ENST00000517270 370 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 OR5G4P-201ENST00000525251 760 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLDN20P56880 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN20P56880 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN20P56880 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN20P56880 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN20P56880 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN20P56880 AL359212.1-201ENST00000556608 614 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AP005205.1-201ENST00000563503 508 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN20P56880 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN20P56880 AF250324.2-201ENST00000608299 610 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AC017083.3-201ENST00000609955 700 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 AC092794.1-201ENST00000612734 582 ntBASIC3.18□□□□□ -1.9
CLDN20P56880 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN20P56880 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN20P56880 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN20P56880 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN20P56880 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN20P56880 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLDN20P56880 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN20P56880 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN20P56880 FRG1CP-201ENST00000358464 769 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 RNU6-1120P-201ENST00000362988 108 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN20P56880 RNU6-641P-201ENST00000384006 107 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 RNU6-74P-201ENST00000384235 107 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 MIR490-201ENST00000384865 128 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLDN20P56880 U3.39-201ENST00000408569 239 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 RNU2-39P-201ENST00000410604 198 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 RN7SKP53-201ENST00000411337 315 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AL451054.2-201ENST00000420896 202 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 NDUFB4P7-201ENST00000423198 363 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN20P56880 ATP5JP1-201ENST00000431631 322 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN20P56880 MTATP6P30-201ENST00000443540 664 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 U3.44-201ENST00000458938 192 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC034236.1-201ENST00000469891 373 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC025518.1-201ENST00000479856 347 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 RN7SL293P-201ENST00000481765 281 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 HSPD1P15-201ENST00000505573 1122 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN20P56880 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN20P56880 OR4R1P-201ENST00000529879 463 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN20P56880 AC007458.1-201ENST00000542812 373 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms