Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PPP1R11P2-201ENST00000423543 382 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC4P56524 OR2B8P-201ENST00000432841 938 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC4P56524 AL162389.1-201ENST00000449233 177 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 SRRM1P2-201ENST00000464531 1192 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 AC012181.1-201ENST00000479895 423 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC4P56524 RPL9P6-201ENST00000492764 598 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 KCTD9P5-201ENST00000504141 1170 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC4P56524 AC108078.1-201ENST00000508073 725 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 MTND4LP22-201ENST00000508209 276 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 AC074250.1-201ENST00000511117 192 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 RNA5SP337-201ENST00000517007 109 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 ERHP1-201ENST00000523006 310 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.56□□□□□ -1.84
HDAC4P56524 AC007458.1-201ENST00000542812 373 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 AC011602.1-201ENST00000546484 331 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.56□□□□□ -1.84
HDAC4P56524 AC055876.1-202ENST00000567053 138 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC4P56524 NRBF2P1-201ENST00000587407 859 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC4P56524 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 AC004696.1-201ENST00000614345 607 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 AC138649.3-201ENST00000622154 254 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 FAM35CP-201ENST00000554755 2470 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC4P56524 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC4P56524 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.55□□□□□ -1.84
HDAC4P56524 MIR30E-201ENST00000362104 92 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 RNA5SP197-201ENST00000363357 119 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 DYNLT3P1-201ENST00000378574 347 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 RNU6-76P-201ENST00000384060 104 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 RNU5A-6P-201ENST00000384136 116 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 RNU2-62P-201ENST00000410868 191 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 RNU6-55P-201ENST00000411092 107 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 RNU6-954P-201ENST00000411355 107 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 UBE2V1P10-201ENST00000414685 269 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 UBE2FP1-201ENST00000416536 447 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.55□□□□□ -1.84
HDAC4P56524 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 AL353705.1-201ENST00000433468 480 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC119618.1-201ENST00000434191 222 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 AC010401.1-201ENST00000463867 348 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 RPL21P8-201ENST00000465083 535 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 AC021205.2-201ENST00000480069 347 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDAC4P56524 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
HDAC4P56524 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 AC022616.3-201ENST00000523940 148 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC022690.1-201ENST00000526681 550 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.55□□□□□ -1.84
HDAC4P56524 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.55□□□□□ -1.84
HDAC4P56524 AP003465.2-201ENST00000602571 373 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC107304.1-201ENST00000604229 296 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC008277.2-201ENST00000605196 797 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AP000860.1-201ENST00000605250 559 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC008962.1-201ENST00000605729 304 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.55□□□□□ -1.84
HDAC4P56524 U3.45-201ENST00000607547 219 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AF250324.2-201ENST00000608299 610 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC103710.2-201ENST00000609912 942 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AL442067.2-201ENST00000614033 363 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 TUG1_2.1-201ENST00000614234 87 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 AC072046.2-201ENST00000618366 268 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HDAC4P56524 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC4P56524 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.55□□□□□ -1.84
HDAC4P56524 ZNF807-201ENST00000328088 1707 ntBASIC3.55□□□□□ -1.84
HDAC4P56524 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HDAC4P56524 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HDAC4P56524 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.55□□□□□ -1.84
HDAC4P56524 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
HDAC4P56524 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
HDAC4P56524 RNY3P13-201ENST00000365542 102 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 MIR490-201ENST00000384865 128 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 MIR183-201ENST00000384958 110 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 MIR493-201ENST00000385254 89 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HDAC4P56524 RPS15AP12-201ENST00000419498 388 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms