Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.54□□□□□ -2
LIM2P55344 LRRC34P1-201ENST00000542742 915 ntBASIC2.54□□□□□ -2
LIM2P55344 DNAJC8P1-201ENST00000554535 372 ntBASIC2.54□□□□□ -2
LIM2P55344 MTCO3P13-201ENST00000577757 781 ntBASIC2.54□□□□□ -2
LIM2P55344 AF038458.1-201ENST00000588406 262 ntBASIC2.54□□□□□ -2
LIM2P55344 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.54□□□□□ -2
LIM2P55344 AC007619.2-201ENST00000605743 379 ntBASIC2.54□□□□□ -2
LIM2P55344 AC107214.2-201ENST00000608204 634 ntBASIC2.54□□□□□ -2
LIM2P55344 AL360219.1-201ENST00000610230 366 ntBASIC2.54□□□□□ -2
LIM2P55344 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.54□□□□□ -2
LIM2P55344 SNHG22-203ENST00000617833 660 ntBASIC2.54□□□□□ -2
LIM2P55344 AC079248.2-201ENST00000623779 326 ntBASIC2.54□□□□□ -2
LIM2P55344 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
LIM2P55344 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.54□□□□□ -2
LIM2P55344 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.54□□□□□ -2
LIM2P55344 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LIM2P55344 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.53□□□□□ -2
LIM2P55344 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.53□□□□□ -2
LIM2P55344 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LIM2P55344 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LIM2P55344 Y_RNA.97-201ENST00000363094 102 ntBASIC2.53□□□□□ -2
LIM2P55344 RNU6-1284P-201ENST00000363701 100 ntBASIC2.53□□□□□ -2
LIM2P55344 RNU6-501P-201ENST00000364072 100 ntBASIC2.53□□□□□ -2
LIM2P55344 U8.14-201ENST00000390843 143 ntBASIC2.53□□□□□ -2
LIM2P55344 SNORD115.1-201ENST00000391109 76 ntBASIC2.53□□□□□ -2
LIM2P55344 RNA5SP252-201ENST00000391131 119 ntBASIC2.53□□□□□ -2
LIM2P55344 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LIM2P55344 RN7SKP140-201ENST00000411196 284 ntBASIC2.53□□□□□ -2
LIM2P55344 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.53□□□□□ -2
LIM2P55344 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
LIM2P55344 SAR1AP4-201ENST00000429225 591 ntBASIC2.53□□□□□ -2
LIM2P55344 AC005094.1-201ENST00000440420 368 ntBASIC2.53□□□□□ -2
LIM2P55344 AC020550.1-201ENST00000447385 163 ntBASIC2.53□□□□□ -2
LIM2P55344 AC104472.2-201ENST00000469035 601 ntBASIC2.53□□□□□ -2
LIM2P55344 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.53□□□□□ -2
LIM2P55344 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.53□□□□□ -2
LIM2P55344 AC005178.1-201ENST00000508392 440 ntBASIC2.53□□□□□ -2
LIM2P55344 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.53□□□□□ -2
LIM2P55344 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.53□□□□□ -2
LIM2P55344 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.53□□□□□ -2
LIM2P55344 AP000907.2-201ENST00000530827 353 ntBASIC2.53□□□□□ -2
LIM2P55344 AC007536.1-201ENST00000533382 349 ntBASIC2.53□□□□□ -2
LIM2P55344 AC093012.1-202ENST00000549403 582 ntBASIC2.53□□□□□ -2
LIM2P55344 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.53□□□□□ -2
LIM2P55344 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.53□□□□□ -2
LIM2P55344 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.53□□□□□ -2
LIM2P55344 AL137843.1-201ENST00000605078 385 ntBASIC2.53□□□□□ -2
LIM2P55344 AC026790.2-201ENST00000606282 430 ntBASIC2.53□□□□□ -2
LIM2P55344 AL355816.2-201ENST00000610049 647 ntBASIC2.53□□□□□ -2
LIM2P55344 AC087683.2-201ENST00000611384 326 ntBASIC2.53□□□□□ -2
LIM2P55344 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.53□□□□□ -2
LIM2P55344 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.53□□□□□ -2
LIM2P55344 AC009159.2-201ENST00000617603 606 ntBASIC2.53□□□□□ -2
LIM2P55344 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.53□□□□□ -2
LIM2P55344 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.53□□□□□ -2
LIM2P55344 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.53□□□□□ -2
LIM2P55344 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LIM2P55344 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.53□□□□□ -2
LIM2P55344 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.53□□□□□ -2
LIM2P55344 AC008669.1-201ENST00000565823 2178 ntBASIC2.53□□□□□ -2
LIM2P55344 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.53□□□□□ -2.01
LIM2P55344 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.52□□□□□ -2.01
LIM2P55344 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LIM2P55344 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.52□□□□□ -2.01
LIM2P55344 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
LIM2P55344 RNA5SP139-201ENST00000364340 117 ntBASIC2.52□□□□□ -2.01
LIM2P55344 RNU6-660P-201ENST00000364566 109 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AL356057.3-201ENST00000402607 340 ntBASIC2.52□□□□□ -2.01
LIM2P55344 RPL21P24-201ENST00000413752 448 ntBASIC2.52□□□□□ -2.01
LIM2P55344 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 AC005005.2-201ENST00000420779 380 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 AL353777.1-201ENST00000425552 326 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AC092447.3-201ENST00000426027 686 ntBASIC2.52□□□□□ -2.01
LIM2P55344 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.52□□□□□ -2.01
LIM2P55344 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 RPL36AP6-201ENST00000435770 321 ntBASIC2.52□□□□□ -2.01
LIM2P55344 RPL39P40-201ENST00000445481 146 ntBASIC2.52□□□□□ -2.01
LIM2P55344 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 AC087588.1-201ENST00000462203 316 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AL135752.1-201ENST00000479477 471 ntBASIC2.52□□□□□ -2.01
LIM2P55344 RPS3AP22-201ENST00000488297 769 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 OR5BM1P-201ENST00000512021 366 ntBASIC2.52□□□□□ -2.01
LIM2P55344 TTC39CP1-201ENST00000512513 755 ntBASIC2.52□□□□□ -2.01
LIM2P55344 MRPS33P3-201ENST00000513456 322 ntBASIC2.52□□□□□ -2.01
LIM2P55344 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.52□□□□□ -2.01
LIM2P55344 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 RNU6-927P-201ENST00000516199 100 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 AP002748.2-201ENST00000528671 348 ntBASIC2.52□□□□□ -2.01
LIM2P55344 DEFB108A-201ENST00000530110 222 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AP000867.2-201ENST00000532468 320 ntBASIC2.52□□□□□ -2.01
LIM2P55344 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.52□□□□□ -2.01
LIM2P55344 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.52□□□□□ -2.01
LIM2P55344 AC091489.2-201ENST00000566263 604 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AC106782.4-201ENST00000568264 210 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms