Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDH12P55289 RNU6-876P-201ENST00000391295 104 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AC008850.1-201ENST00000427546 362 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH12P55289 NEK4P1-201ENST00000433383 879 ntBASIC3.35□□□□□ -1.87
CDH12P55289 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH12P55289 AC020550.1-201ENST00000447385 163 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AL118520.1-201ENST00000450770 291 ntBASIC3.35□□□□□ -1.87
CDH12P55289 snoU13.4-201ENST00000458916 104 ntBASIC3.35□□□□□ -1.87
CDH12P55289 RPL23AP55-201ENST00000498163 452 ntBASIC3.35□□□□□ -1.87
CDH12P55289 SNORA20.3-201ENST00000516880 132 ntBASIC3.35□□□□□ -1.87
CDH12P55289 RN7SKP60-201ENST00000516985 239 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AF235103.2-201ENST00000525753 346 ntBASIC3.35□□□□□ -1.87
CDH12P55289 OR5B10P-201ENST00000532869 642 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.35□□□□□ -1.87
CDH12P55289 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH12P55289 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH12P55289 AC087499.8-201ENST00000578406 226 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AC067852.3-201ENST00000589177 561 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH12P55289 NRBF2P5-201ENST00000603087 788 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.35□□□□□ -1.87
CDH12P55289 DISC2.1-201ENST00000612827 205 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AC005344.1-201ENST00000613391 459 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AL355810.1-201ENST00000614629 552 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AP001486.3-201ENST00000615334 372 ntBASIC3.35□□□□□ -1.87
CDH12P55289 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AC025034.2-201ENST00000623264 286 ntBASIC3.35□□□□□ -1.87
CDH12P55289 AL008636.1-201ENST00000625038 1018 ntBASIC3.35□□□□□ -1.87
CDH12P55289 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH12P55289 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH12P55289 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CDH12P55289 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH12P55289 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH12P55289 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH12P55289 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.35□□□□□ -1.87
CDH12P55289 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH12P55289 AL354685.2-201ENST00000448218 1447 ntBASIC3.35□□□□□ -1.87
CDH12P55289 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH12P55289 AP004289.2-201ENST00000444413 1457 ntBASIC3.35□□□□□ -1.87
CDH12P55289 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH12P55289 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH12P55289 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH12P55289 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH12P55289 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CDH12P55289 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH12P55289 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH12P55289 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH12P55289 AL139276.1-201ENST00000311910 1001 ntBASIC3.34□□□□□ -1.87
CDH12P55289 SNORA72.1-201ENST00000363485 129 ntBASIC3.34□□□□□ -1.87
CDH12P55289 SNORD115-7-201ENST00000365306 82 ntBASIC3.34□□□□□ -1.87
CDH12P55289 RNU6-14P-201ENST00000384630 106 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH12P55289 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH12P55289 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH12P55289 AL139247.1-201ENST00000422768 325 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH12P55289 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CDH12P55289 CALM1P1-201ENST00000442082 433 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AL671855.1-201ENST00000446875 1203 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH12P55289 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH12P55289 RPL23AP31-201ENST00000456160 467 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH12P55289 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH12P55289 EIF4EP3-201ENST00000498782 656 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH12P55289 AC108078.2-201ENST00000510750 236 ntBASIC3.34□□□□□ -1.87
CDH12P55289 GMPSP1-201ENST00000514075 579 ntBASIC3.34□□□□□ -1.87
CDH12P55289 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.34□□□□□ -1.87
CDH12P55289 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH12P55289 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH12P55289 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH12P55289 OR8R1P-201ENST00000543943 764 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AL138976.2-201ENST00000563989 694 ntBASIC3.34□□□□□ -1.87
CDH12P55289 AC007224.1-201ENST00000564410 144 ntBASIC3.34□□□□□ -1.87
CDH12P55289 RN7SL703P-201ENST00000578485 302 ntBASIC3.34□□□□□ -1.87
CDH12P55289 MIR4286-201ENST00000580651 93 ntBASIC3.34□□□□□ -1.87
CDH12P55289 RNU1-30P-201ENST00000606575 163 ntBASIC3.34□□□□□ -1.87
CDH12P55289 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.34□□□□□ -1.87
CDH12P55289 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CDH12P55289 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH12P55289 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CDH12P55289 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CDH12P55289 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH12P55289 RNU5A-1-201ENST00000362698 116 ntBASIC3.33□□□□□ -1.88
CDH12P55289 Y_RNA.576-201ENST00000384781 102 ntBASIC3.33□□□□□ -1.88
CDH12P55289 RNU6-903P-201ENST00000391270 109 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AL356776.1-201ENST00000406574 447 ntBASIC3.33□□□□□ -1.88
CDH12P55289 RN7SKP140-201ENST00000411196 284 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH12P55289 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH12P55289 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.33□□□□□ -1.88
CDH12P55289 RPL36AP53-201ENST00000432891 316 ntBASIC3.33□□□□□ -1.88
CDH12P55289 RPL21P112-201ENST00000434403 463 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms