Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEK3P51956 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
NEK3P51956 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.84□□□□□ -1.79
NEK3P51956 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEK3P51956 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
NEK3P51956 FTLP6-201ENST00000355274 422 ntBASIC3.84□□□□□ -1.79
NEK3P51956 RNA5SP124-201ENST00000362739 110 ntBASIC3.84□□□□□ -1.79
NEK3P51956 RNU6-288P-201ENST00000363690 104 ntBASIC3.84□□□□□ -1.79
NEK3P51956 SNORA14A-201ENST00000364773 135 ntBASIC3.84□□□□□ -1.79
NEK3P51956 RNU6-61P-201ENST00000365528 109 ntBASIC3.84□□□□□ -1.79
NEK3P51956 MIR200C-201ENST00000384980 68 ntBASIC3.84□□□□□ -1.79
NEK3P51956 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NEK3P51956 AL391417.1-201ENST00000404100 426 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.84□□□□□ -1.79
NEK3P51956 AL139247.1-201ENST00000422768 325 ntBASIC3.84□□□□□ -1.79
NEK3P51956 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.84□□□□□ -1.79
NEK3P51956 AC010099.1-201ENST00000455434 375 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AL133162.1-201ENST00000463228 453 ntBASIC3.84□□□□□ -1.79
NEK3P51956 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.84□□□□□ -1.79
NEK3P51956 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.84□□□□□ -1.79
NEK3P51956 TRMT10BP1-201ENST00000519377 943 ntBASIC3.84□□□□□ -1.79
NEK3P51956 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEK3P51956 AP000867.2-201ENST00000532468 320 ntBASIC3.84□□□□□ -1.79
NEK3P51956 ADI1P3-201ENST00000549509 470 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.84□□□□□ -1.79
NEK3P51956 AC010591.1-201ENST00000603941 649 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
NEK3P51956 MIR92B-201ENST00000607575 96 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AC007684.1-201ENST00000609671 477 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AC012409.4-201ENST00000612923 249 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AC025034.2-201ENST00000623264 286 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AC093648.1-201ENST00000623546 606 ntBASIC3.84□□□□□ -1.79
NEK3P51956 AP003122.6-201ENST00000623831 495 ntBASIC3.84□□□□□ -1.79
NEK3P51956 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.84□□□□□ -1.79
NEK3P51956 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.84□□□□□ -1.79
NEK3P51956 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
NEK3P51956 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NEK3P51956 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
NEK3P51956 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEK3P51956 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NEK3P51956 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEK3P51956 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NEK3P51956 Y_RNA.1-201ENST00000352915 104 ntBASIC3.83□□□□□ -1.8
NEK3P51956 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEK3P51956 RNU6-270P-201ENST00000364131 105 ntBASIC3.83□□□□□ -1.8
NEK3P51956 RNU6-512P-201ENST00000364438 103 ntBASIC3.83□□□□□ -1.8
NEK3P51956 RNU6-283P-201ENST00000364788 107 ntBASIC3.83□□□□□ -1.8
NEK3P51956 Y_RNA.534-201ENST00000384599 112 ntBASIC3.83□□□□□ -1.8
NEK3P51956 U8.11-201ENST00000384699 133 ntBASIC3.83□□□□□ -1.8
NEK3P51956 U8.12-201ENST00000384701 133 ntBASIC3.83□□□□□ -1.8
NEK3P51956 RNU4-55P-201ENST00000410731 137 ntBASIC3.83□□□□□ -1.8
NEK3P51956 RNU2-68P-201ENST00000410878 191 ntBASIC3.83□□□□□ -1.8
NEK3P51956 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NEK3P51956 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.83□□□□□ -1.8
NEK3P51956 AC114491.1-201ENST00000416095 246 ntBASIC3.83□□□□□ -1.8
NEK3P51956 AL451062.2-201ENST00000427515 271 ntBASIC3.83□□□□□ -1.8
NEK3P51956 DPPA2P1-201ENST00000428060 556 ntBASIC3.83□□□□□ -1.8
NEK3P51956 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NEK3P51956 HIGD1AP11-201ENST00000438361 280 ntBASIC3.83□□□□□ -1.8
NEK3P51956 RPS29P31-201ENST00000446147 164 ntBASIC3.83□□□□□ -1.8
NEK3P51956 FABP5P13-201ENST00000452144 328 ntBASIC3.83□□□□□ -1.8
NEK3P51956 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.83□□□□□ -1.8
NEK3P51956 U8.18-201ENST00000459285 133 ntBASIC3.83□□□□□ -1.8
NEK3P51956 MRPS17P3-201ENST00000465453 385 ntBASIC3.83□□□□□ -1.8
NEK3P51956 SLC25A15P5-201ENST00000508033 253 ntBASIC3.83□□□□□ -1.8
NEK3P51956 RNA5SP208-201ENST00000516156 78 ntBASIC3.83□□□□□ -1.8
NEK3P51956 Y_RNA.689-201ENST00000516589 107 ntBASIC3.83□□□□□ -1.8
NEK3P51956 RNU6-928P-201ENST00000516876 104 ntBASIC3.83□□□□□ -1.8
NEK3P51956 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEK3P51956 AC074050.1-201ENST00000563247 211 ntBASIC3.83□□□□□ -1.8
NEK3P51956 Z84480.1-201ENST00000605131 311 ntBASIC3.83□□□□□ -1.8
NEK3P51956 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.83□□□□□ -1.8
NEK3P51956 AC099506.2-201ENST00000623074 221 ntBASIC3.83□□□□□ -1.8
NEK3P51956 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.83□□□□□ -1.8
NEK3P51956 SEPT14P19-203ENST00000633205 211 ntBASIC3.83□□□□□ -1.8
NEK3P51956 U6.114-201ENST00000636407 96 ntBASIC3.83□□□□□ -1.8
NEK3P51956 AC012442.3-202ENST00000636742 206 ntBASIC3.83□□□□□ -1.8
NEK3P51956 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NEK3P51956 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEK3P51956 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.82□□□□□ -1.8
NEK3P51956 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK3P51956 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEK3P51956 MIR1-2-201ENST00000384961 85 ntBASIC3.82□□□□□ -1.8
NEK3P51956 RAB9AP3-201ENST00000412737 573 ntBASIC3.82□□□□□ -1.8
NEK3P51956 OR51A5P-201ENST00000415429 942 ntBASIC3.82□□□□□ -1.8
NEK3P51956 MTCO2P19-201ENST00000427513 598 ntBASIC3.82□□□□□ -1.8
NEK3P51956 NANOGNBP1-201ENST00000448444 480 ntBASIC3.82□□□□□ -1.8
NEK3P51956 RAB9AP1-201ENST00000449393 573 ntBASIC3.82□□□□□ -1.8
NEK3P51956 PSPHP1-201ENST00000450062 261 ntBASIC3.82□□□□□ -1.8
NEK3P51956 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK3P51956 AL356010.1-201ENST00000456364 102 ntBASIC3.82□□□□□ -1.8
NEK3P51956 RNU7-170P-201ENST00000459303 61 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC004801.2-202ENST00000463559 283 ntBASIC3.82□□□□□ -1.8
NEK3P51956 GMFBP1-201ENST00000467831 427 ntBASIC3.82□□□□□ -1.8
NEK3P51956 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.82□□□□□ -1.8
NEK3P51956 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.82□□□□□ -1.8
NEK3P51956 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK3P51956 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.82□□□□□ -1.8
NEK3P51956 HMGN1P11-201ENST00000508668 303 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms