Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.37□□□□□ -2.03
RFX3P48380 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX3P48380 AC010486.1-201ENST00000511793 424 ntBASIC2.37□□□□□ -2.03
RFX3P48380 SCARNA1-201ENST00000517138 166 ntBASIC2.37□□□□□ -2.03
RFX3P48380 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.37□□□□□ -2.03
RFX3P48380 ATP5F1P5-201ENST00000526403 760 ntBASIC2.37□□□□□ -2.03
RFX3P48380 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RFX3P48380 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.37□□□□□ -2.03
RFX3P48380 AC025281.1-201ENST00000567026 265 ntBASIC2.37□□□□□ -2.03
RFX3P48380 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
RFX3P48380 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX3P48380 TPMTP1-201ENST00000592307 737 ntBASIC2.37□□□□□ -2.03
RFX3P48380 AL139344.1-201ENST00000605228 195 ntBASIC2.37□□□□□ -2.03
RFX3P48380 AC106052.1-201ENST00000608029 497 ntBASIC2.37□□□□□ -2.03
RFX3P48380 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX3P48380 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.37□□□□□ -2.03
RFX3P48380 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.37□□□□□ -2.03
RFX3P48380 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RFX3P48380 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RFX3P48380 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RFX3P48380 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
RFX3P48380 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.36□□□□□ -2.03
RFX3P48380 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX3P48380 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RFX3P48380 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX3P48380 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX3P48380 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX3P48380 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX3P48380 ZNF863P-201ENST00000426746 417 ntBASIC2.36□□□□□ -2.03
RFX3P48380 RPL35AP22-201ENST00000436855 335 ntBASIC2.36□□□□□ -2.03
RFX3P48380 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.36□□□□□ -2.03
RFX3P48380 RPL7P18-201ENST00000478965 734 ntBASIC2.36□□□□□ -2.03
RFX3P48380 RN7SL432P-201ENST00000484057 298 ntBASIC2.36□□□□□ -2.03
RFX3P48380 RPL36AP51-201ENST00000487216 318 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AC090096.1-201ENST00000489168 390 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AC021146.8-201ENST00000507455 733 ntBASIC2.36□□□□□ -2.03
RFX3P48380 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.36□□□□□ -2.03
RFX3P48380 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX3P48380 AC008716.1-201ENST00000511084 513 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX3P48380 SCARNA17.1-201ENST00000516211 143 ntBASIC2.36□□□□□ -2.03
RFX3P48380 SCARNA17.2-201ENST00000516334 143 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX3P48380 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.36□□□□□ -2.03
RFX3P48380 SUB1P1-201ENST00000524415 382 ntBASIC2.36□□□□□ -2.03
RFX3P48380 COX6CP5-201ENST00000527162 228 ntBASIC2.36□□□□□ -2.03
RFX3P48380 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFX3P48380 AC123904.3-201ENST00000547218 814 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AC009163.5-201ENST00000575421 637 ntBASIC2.36□□□□□ -2.03
RFX3P48380 MIR3908-201ENST00000579798 126 ntBASIC2.36□□□□□ -2.03
RFX3P48380 MIR4298-201ENST00000584380 73 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AL596327.1-201ENST00000603629 213 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AC112220.3-201ENST00000605502 502 ntBASIC2.36□□□□□ -2.03
RFX3P48380 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX3P48380 SCARNA17.4-201ENST00000614296 143 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX3P48380 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.36□□□□□ -2.03
RFX3P48380 AC019226.1-201ENST00000625666 515 ntBASIC2.36□□□□□ -2.03
RFX3P48380 AP000776.1-201ENST00000530032 1663 ntBASIC2.36□□□□□ -2.03
RFX3P48380 ZNF271P-202ENST00000465539 1970 ntBASIC2.36□□□□□ -2.03
RFX3P48380 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFX3P48380 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.35□□□□□ -2.03
RFX3P48380 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX3P48380 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RFX3P48380 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
RFX3P48380 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX3P48380 RNU6-462P-201ENST00000362659 105 ntBASIC2.35□□□□□ -2.03
RFX3P48380 RNU6-223P-201ENST00000362830 107 ntBASIC2.35□□□□□ -2.03
RFX3P48380 RNU6-884P-201ENST00000363889 107 ntBASIC2.35□□□□□ -2.03
RFX3P48380 RNU1-100P-201ENST00000365255 165 ntBASIC2.35□□□□□ -2.03
RFX3P48380 RNU6-744P-201ENST00000365557 107 ntBASIC2.35□□□□□ -2.03
RFX3P48380 RNU6-1316P-201ENST00000384242 108 ntBASIC2.35□□□□□ -2.03
RFX3P48380 RNU6-906P-201ENST00000384700 70 ntBASIC2.35□□□□□ -2.03
RFX3P48380 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RFX3P48380 RNU6-516P-201ENST00000411381 104 ntBASIC2.35□□□□□ -2.03
RFX3P48380 MTCO2P8-201ENST00000412213 658 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AC080125.1-201ENST00000414888 684 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AC083875.1-201ENST00000419509 405 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AL451054.2-201ENST00000420896 202 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.35□□□□□ -2.03
RFX3P48380 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.35□□□□□ -2.03
RFX3P48380 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX3P48380 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.35□□□□□ -2.03
RFX3P48380 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX3P48380 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.35□□□□□ -2.03
RFX3P48380 AC108938.1-201ENST00000451204 136 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.35□□□□□ -2.03
RFX3P48380 RPL23AP94-201ENST00000512518 302 ntBASIC2.35□□□□□ -2.03
RFX3P48380 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX3P48380 RNA5SP471-201ENST00000516971 106 ntBASIC2.35□□□□□ -2.03
RFX3P48380 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AC022634.1-201ENST00000520765 532 ntBASIC2.35□□□□□ -2.03
RFX3P48380 OR5BN1P-201ENST00000532955 829 ntBASIC2.35□□□□□ -2.03
RFX3P48380 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.35□□□□□ -2.03
RFX3P48380 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.35□□□□□ -2.03
RFX3P48380 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX3P48380 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.35□□□□□ -2.03
RFX3P48380 NRBF2P5-201ENST00000603087 788 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AL133445.2-201ENST00000611191 527 ntBASIC2.35□□□□□ -2.03
RFX3P48380 AC104237.2-201ENST00000612456 443 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms