Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SSR1P43307 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SSR1P43307 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SSR1P43307 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SSR1P43307 RN7SKP226-201ENST00000364912 300 ntBASIC2.59□□□□□ -1.99
SSR1P43307 RNU1-51P-201ENST00000365345 176 ntBASIC2.59□□□□□ -1.99
SSR1P43307 RNU6-744P-201ENST00000365557 107 ntBASIC2.59□□□□□ -1.99
SSR1P43307 RNU6-413P-201ENST00000384115 107 ntBASIC2.59□□□□□ -1.99
SSR1P43307 RNU6-1316P-201ENST00000384242 108 ntBASIC2.59□□□□□ -1.99
SSR1P43307 MIR17-201ENST00000385012 84 ntBASIC2.59□□□□□ -1.99
SSR1P43307 RNU6-1176P-201ENST00000390955 107 ntBASIC2.59□□□□□ -1.99
SSR1P43307 SNORA46.1-201ENST00000391069 153 ntBASIC2.59□□□□□ -1.99
SSR1P43307 U3.37-201ENST00000408528 213 ntBASIC2.59□□□□□ -1.99
SSR1P43307 RNU2-40P-201ENST00000410833 196 ntBASIC2.59□□□□□ -1.99
SSR1P43307 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.59□□□□□ -1.99
SSR1P43307 AC019097.1-201ENST00000424783 735 ntBASIC2.59□□□□□ -1.99
SSR1P43307 UBE2FP3-201ENST00000436366 524 ntBASIC2.59□□□□□ -1.99
SSR1P43307 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.59□□□□□ -1.99
SSR1P43307 BNIP3P2-201ENST00000441221 577 ntBASIC2.59□□□□□ -1.99
SSR1P43307 BMI1P1-201ENST00000445879 941 ntBASIC2.59□□□□□ -1.99
SSR1P43307 ARPC3P5-201ENST00000448802 534 ntBASIC2.59□□□□□ -1.99
SSR1P43307 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.59□□□□□ -1.99
SSR1P43307 MTATP6P14-201ENST00000455189 673 ntBASIC2.59□□□□□ -1.99
SSR1P43307 AC096576.1-201ENST00000489014 359 ntBASIC2.59□□□□□ -1.99
SSR1P43307 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.59□□□□□ -1.99
SSR1P43307 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.59□□□□□ -1.99
SSR1P43307 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
SSR1P43307 EIF4BP1-201ENST00000554881 351 ntBASIC2.59□□□□□ -1.99
SSR1P43307 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.59□□□□□ -1.99
SSR1P43307 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.59□□□□□ -1.99
SSR1P43307 VN1R92P-201ENST00000598511 928 ntBASIC2.59□□□□□ -1.99
SSR1P43307 BNIP3P26-201ENST00000600827 554 ntBASIC2.59□□□□□ -1.99
SSR1P43307 AL355877.2-201ENST00000603670 358 ntBASIC2.59□□□□□ -1.99
SSR1P43307 KPNA2P1-201ENST00000458289 1591 ntBASIC2.58□□□□□ -2
SSR1P43307 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSR1P43307 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSR1P43307 SNORA5B-201ENST00000363786 132 ntBASIC2.58□□□□□ -2
SSR1P43307 SNORA16B-201ENST00000364674 135 ntBASIC2.58□□□□□ -2
SSR1P43307 RNU6-637P-201ENST00000384050 107 ntBASIC2.58□□□□□ -2
SSR1P43307 MIR1290-201ENST00000408735 78 ntBASIC2.58□□□□□ -2
SSR1P43307 MTATP6P19-201ENST00000413797 659 ntBASIC2.58□□□□□ -2
SSR1P43307 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.58□□□□□ -2
SSR1P43307 AL953862.1-201ENST00000423016 168 ntBASIC2.58□□□□□ -2
SSR1P43307 WARS2P1-201ENST00000429678 537 ntBASIC2.58□□□□□ -2
SSR1P43307 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.58□□□□□ -2
SSR1P43307 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.58□□□□□ -2
SSR1P43307 OR10R1P-201ENST00000441524 1141 ntBASIC2.58□□□□□ -2
SSR1P43307 CBWD4P-201ENST00000445695 655 ntBASIC2.58□□□□□ -2
SSR1P43307 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
SSR1P43307 EXOSC3P1-201ENST00000448649 500 ntBASIC2.58□□□□□ -2
SSR1P43307 ATG12P2-201ENST00000456830 416 ntBASIC2.58□□□□□ -2
SSR1P43307 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.58□□□□□ -2
SSR1P43307 AC128713.1-201ENST00000471495 306 ntBASIC2.58□□□□□ -2
SSR1P43307 AC021382.1-201ENST00000483523 359 ntBASIC2.58□□□□□ -2
SSR1P43307 RNA5SP320-201ENST00000516263 124 ntBASIC2.58□□□□□ -2
SSR1P43307 AC010376.1-201ENST00000522101 334 ntBASIC2.58□□□□□ -2
SSR1P43307 AC021451.1-201ENST00000523498 1129 ntBASIC2.58□□□□□ -2
SSR1P43307 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.58□□□□□ -2
SSR1P43307 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
SSR1P43307 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.58□□□□□ -2
SSR1P43307 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.58□□□□□ -2
SSR1P43307 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.58□□□□□ -2
SSR1P43307 DNAJC19P3-201ENST00000594491 331 ntBASIC2.58□□□□□ -2
SSR1P43307 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.58□□□□□ -2
SSR1P43307 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.58□□□□□ -2
SSR1P43307 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SSR1P43307 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSR1P43307 FTLP6-201ENST00000355274 422 ntBASIC2.57□□□□□ -2
SSR1P43307 RNU5E-10P-201ENST00000363506 118 ntBASIC2.57□□□□□ -2
SSR1P43307 SNORA80A-201ENST00000363922 136 ntBASIC2.57□□□□□ -2
SSR1P43307 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
SSR1P43307 RNU6-560P-201ENST00000364007 108 ntBASIC2.57□□□□□ -2
SSR1P43307 U8.8-201ENST00000365399 135 ntBASIC2.57□□□□□ -2
SSR1P43307 MIR122-201ENST00000385044 85 ntBASIC2.57□□□□□ -2
SSR1P43307 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
SSR1P43307 ERHP2-201ENST00000402323 299 ntBASIC2.57□□□□□ -2
SSR1P43307 RN7SKP140-201ENST00000411196 284 ntBASIC2.57□□□□□ -2
SSR1P43307 RPS3AP37-201ENST00000419176 745 ntBASIC2.57□□□□□ -2
SSR1P43307 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.57□□□□□ -2
SSR1P43307 USP9YP11-201ENST00000427537 717 ntBASIC2.57□□□□□ -2
SSR1P43307 SRIP2-201ENST00000428470 166 ntBASIC2.57□□□□□ -2
SSR1P43307 AL356867.1-201ENST00000429623 299 ntBASIC2.57□□□□□ -2
SSR1P43307 EEF1A1P39-201ENST00000440791 250 ntBASIC2.57□□□□□ -2
SSR1P43307 AL049734.2-201ENST00000441066 616 ntBASIC2.57□□□□□ -2
SSR1P43307 MTATP6P30-201ENST00000443540 664 ntBASIC2.57□□□□□ -2
SSR1P43307 OSTCP8-201ENST00000445117 448 ntBASIC2.57□□□□□ -2
SSR1P43307 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.57□□□□□ -2
SSR1P43307 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.57□□□□□ -2
SSR1P43307 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.57□□□□□ -2
SSR1P43307 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.57□□□□□ -2
SSR1P43307 AC116353.3-201ENST00000511215 249 ntBASIC2.57□□□□□ -2
SSR1P43307 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.57□□□□□ -2
SSR1P43307 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.57□□□□□ -2
SSR1P43307 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.57□□□□□ -2
SSR1P43307 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.57□□□□□ -2
SSR1P43307 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.57□□□□□ -2
SSR1P43307 AL391261.3-201ENST00000557194 520 ntBASIC2.57□□□□□ -2
SSR1P43307 MTCYBP23-201ENST00000558717 1102 ntBASIC2.57□□□□□ -2
SSR1P43307 UBE2L4-201ENST00000587688 464 ntBASIC2.57□□□□□ -2
SSR1P43307 AL357094.1-201ENST00000603845 844 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms