Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL26P9-201ENST00000457466 433 ntBASIC0.86□□□□□ -2.27
HTTP42858 RPS23P3-201ENST00000470993 430 ntBASIC0.86□□□□□ -2.27
HTTP42858 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.86□□□□□ -2.27
HTTP42858 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.86□□□□□ -2.27
HTTP42858 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.86□□□□□ -2.27
HTTP42858 SNORA48.11-201ENST00000517015 89 ntBASIC0.86□□□□□ -2.27
HTTP42858 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.86□□□□□ -2.27
HTTP42858 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.86□□□□□ -2.27
HTTP42858 FAM157A-202ENST00000615155 405 ntBASIC0.86□□□□□ -2.27
HTTP42858 MIR329-2-201ENST00000385029 84 ntBASIC0.85□□□□□ -2.27
HTTP42858 ANAPC10P1-201ENST00000395991 556 ntBASIC0.85□□□□□ -2.27
HTTP42858 MTND2P16-201ENST00000419987 799 ntBASIC0.85□□□□□ -2.27
HTTP42858 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.85□□□□□ -2.27
HTTP42858 MTND5P11-201ENST00000511037 1812 ntBASIC0.85□□□□□ -2.27
HTTP42858 MIR150-201ENST00000385048 84 ntBASIC0.85□□□□□ -2.27
HTTP42858 MTCO1P43-201ENST00000431831 488 ntBASIC0.85□□□□□ -2.27
HTTP42858 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.85□□□□□ -2.27
HTTP42858 LSM1P1-201ENST00000438629 273 ntBASIC0.85□□□□□ -2.27
HTTP42858 AL627224.1-201ENST00000448334 444 ntBASIC0.85□□□□□ -2.27
HTTP42858 AC121161.1-201ENST00000510606 652 ntBASIC0.85□□□□□ -2.27
HTTP42858 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
HTTP42858 SNORA2A-201ENST00000383885 135 ntBASIC0.84□□□□□ -2.27
HTTP42858 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
HTTP42858 MIR4802-201ENST00000581881 80 ntBASIC0.84□□□□□ -2.27
HTTP42858 SNORD56.5-201ENST00000364281 72 ntBASIC0.84□□□□□ -2.27
HTTP42858 AC092832.1-201ENST00000422934 400 ntBASIC0.84□□□□□ -2.27
HTTP42858 HMGB1P9-201ENST00000429856 646 ntBASIC0.84□□□□□ -2.27
HTTP42858 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.84□□□□□ -2.27
HTTP42858 GPM6BP3-201ENST00000442797 145 ntBASIC0.84□□□□□ -2.27
HTTP42858 AC104472.2-201ENST00000469035 601 ntBASIC0.84□□□□□ -2.27
HTTP42858 AC104692.1-201ENST00000472406 90 ntBASIC0.84□□□□□ -2.27
HTTP42858 NOP56P3-201ENST00000549457 385 ntBASIC0.84□□□□□ -2.27
HTTP42858 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.84□□□□□ -2.27
HTTP42858 UBE2L4-201ENST00000587688 464 ntBASIC0.84□□□□□ -2.27
HTTP42858 MIR203B-201ENST00000636080 86 ntBASIC0.84□□□□□ -2.27
HTTP42858 RNU1-23P-201ENST00000363361 144 ntBASIC0.84□□□□□ -2.28
HTTP42858 SNORA23-201ENST00000365128 182 ntBASIC0.84□□□□□ -2.28
HTTP42858 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.84□□□□□ -2.28
HTTP42858 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
HTTP42858 Y_RNA.571-201ENST00000384753 98 ntBASIC0.83□□□□□ -2.28
HTTP42858 RPS29P28-201ENST00000446439 141 ntBASIC0.83□□□□□ -2.28
HTTP42858 AL136380.1-201ENST00000447970 162 ntBASIC0.83□□□□□ -2.28
HTTP42858 AC104685.1-201ENST00000502445 371 ntBASIC0.83□□□□□ -2.28
HTTP42858 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HTTP42858 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.83□□□□□ -2.28
HTTP42858 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HTTP42858 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HTTP42858 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.83□□□□□ -2.28
HTTP42858 AC005786.1-201ENST00000588553 154 ntBASIC0.83□□□□□ -2.28
HTTP42858 AL022718.1-201ENST00000412004 84 ntBASIC0.82□□□□□ -2.28
HTTP42858 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
HTTP42858 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.82□□□□□ -2.28
HTTP42858 AC112198.4-201ENST00000515450 351 ntBASIC0.82□□□□□ -2.28
HTTP42858 AC083899.3-201ENST00000603413 594 ntBASIC0.82□□□□□ -2.28
HTTP42858 AC103810.9-201ENST00000606688 112 ntBASIC0.82□□□□□ -2.28
HTTP42858 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
HTTP42858 RNA5SP276-201ENST00000362580 94 ntBASIC0.82□□□□□ -2.28
HTTP42858 RNU6-173P-201ENST00000364215 104 ntBASIC0.82□□□□□ -2.28
HTTP42858 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.82□□□□□ -2.28
HTTP42858 AC008379.1-201ENST00000463655 464 ntBASIC0.82□□□□□ -2.28
HTTP42858 AC092451.1-201ENST00000480211 153 ntBASIC0.82□□□□□ -2.28
HTTP42858 PCNAP1-201ENST00000505363 709 ntBASIC0.82□□□□□ -2.28
HTTP42858 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.82□□□□□ -2.28
HTTP42858 AC113368.1-201ENST00000603736 382 ntBASIC0.82□□□□□ -2.28
HTTP42858 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.82□□□□□ -2.28
HTTP42858 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HTTP42858 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.82□□□□□ -2.28
HTTP42858 FTH1P15-201ENST00000406984 280 ntBASIC0.82□□□□□ -2.28
HTTP42858 RNA5SP25-201ENST00000410815 110 ntBASIC0.82□□□□□ -2.28
HTTP42858 RNA5SP492-201ENST00000411330 114 ntBASIC0.82□□□□□ -2.28
HTTP42858 AL500527.1-201ENST00000448532 255 ntBASIC0.82□□□□□ -2.28
HTTP42858 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.82□□□□□ -2.28
HTTP42858 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.82□□□□□ -2.28
HTTP42858 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.82□□□□□ -2.28
HTTP42858 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.82□□□□□ -2.28
HTTP42858 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.82□□□□□ -2.28
HTTP42858 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
HTTP42858 AC067863.3-201ENST00000624172 122 ntBASIC0.82□□□□□ -2.28
HTTP42858 Y_RNA.142-201ENST00000363491 102 ntBASIC0.81□□□□□ -2.28
HTTP42858 snoU13.19-201ENST00000459148 104 ntBASIC0.81□□□□□ -2.28
HTTP42858 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.81□□□□□ -2.28
HTTP42858 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.81□□□□□ -2.28
HTTP42858 RNA5SP285-201ENST00000516619 119 ntBASIC0.81□□□□□ -2.28
HTTP42858 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.81□□□□□ -2.28
HTTP42858 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.81□□□□□ -2.28
HTTP42858 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.81□□□□□ -2.28
HTTP42858 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
HTTP42858 AL035407.2-201ENST00000454090 378 ntBASIC0.81□□□□□ -2.28
HTTP42858 RNU6-496P-201ENST00000516145 99 ntBASIC0.81□□□□□ -2.28
HTTP42858 SCARNA1-201ENST00000517138 166 ntBASIC0.81□□□□□ -2.28
HTTP42858 AC011468.4-201ENST00000603942 409 ntBASIC0.81□□□□□ -2.28
HTTP42858 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
HTTP42858 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.81□□□□□ -2.28
HTTP42858 AC092648.1-201ENST00000425870 423 ntBASIC0.8□□□□□ -2.28
HTTP42858 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.8□□□□□ -2.28
HTTP42858 AC083923.1-201ENST00000523708 376 ntBASIC0.8□□□□□ -2.28
HTTP42858 AC004812.1-201ENST00000540773 146 ntBASIC0.8□□□□□ -2.28
HTTP42858 MTRNR2L2-201ENST00000604882 87 ntBASIC0.8□□□□□ -2.28
HTTP42858 MTND4P27-201ENST00000450813 1354 ntBASIC0.8□□□□□ -2.28
HTTP42858 OR4G2P-201ENST00000328113 903 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms