Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MTND1P31-201ENST00000449206 961 ntBASIC2.23□□□□□ -2.05
RFC3P40938 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFC3P40938 AC234781.5-201ENST00000508429 271 ntBASIC2.23□□□□□ -2.05
RFC3P40938 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.23□□□□□ -2.05
RFC3P40938 RNU6-150P-201ENST00000516237 95 ntBASIC2.23□□□□□ -2.05
RFC3P40938 MTND1P36-201ENST00000522384 936 ntBASIC2.23□□□□□ -2.05
RFC3P40938 ATP5F1P5-201ENST00000526403 760 ntBASIC2.23□□□□□ -2.05
RFC3P40938 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.23□□□□□ -2.05
RFC3P40938 AC021269.2-201ENST00000532318 330 ntBASIC2.23□□□□□ -2.05
RFC3P40938 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.23□□□□□ -2.05
RFC3P40938 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.23□□□□□ -2.05
RFC3P40938 AC123904.3-201ENST00000547218 814 ntBASIC2.23□□□□□ -2.05
RFC3P40938 MIR3117-201ENST00000584034 78 ntBASIC2.23□□□□□ -2.05
RFC3P40938 AL645944.1-201ENST00000603857 493 ntBASIC2.23□□□□□ -2.05
RFC3P40938 AC136601.2-201ENST00000604356 474 ntBASIC2.23□□□□□ -2.05
RFC3P40938 AC007938.3-201ENST00000604965 623 ntBASIC2.23□□□□□ -2.05
RFC3P40938 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.23□□□□□ -2.05
RFC3P40938 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
RFC3P40938 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RFC3P40938 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFC3P40938 AC069528.2-201ENST00000624849 1991 ntBASIC2.22□□□□□ -2.05
RFC3P40938 RNU6-560P-201ENST00000364007 108 ntBASIC2.22□□□□□ -2.05
RFC3P40938 MIR888-201ENST00000401186 77 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AL590084.2-201ENST00000401481 382 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AL359511.1-201ENST00000402970 211 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AL356421.1-201ENST00000403255 413 ntBASIC2.22□□□□□ -2.05
RFC3P40938 SNORA3.2-201ENST00000408221 125 ntBASIC2.22□□□□□ -2.05
RFC3P40938 U3.37-201ENST00000408528 213 ntBASIC2.22□□□□□ -2.05
RFC3P40938 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFC3P40938 RNU4-53P-201ENST00000410828 140 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AL513331.1-201ENST00000411908 397 ntBASIC2.22□□□□□ -2.05
RFC3P40938 USP9YP27-201ENST00000418455 438 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AL451054.2-201ENST00000420896 202 ntBASIC2.22□□□□□ -2.05
RFC3P40938 USP9YP11-201ENST00000427537 717 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC3P40938 UBE2V1P13-201ENST00000436983 439 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.22□□□□□ -2.05
RFC3P40938 DPPA3P1-201ENST00000448050 469 ntBASIC2.22□□□□□ -2.05
RFC3P40938 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.22□□□□□ -2.05
RFC3P40938 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC3P40938 RPL36AP51-201ENST00000487216 318 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC3P40938 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC3P40938 RNA5SP471-201ENST00000516971 106 ntBASIC2.22□□□□□ -2.05
RFC3P40938 HMGN1P28-201ENST00000521340 364 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AC010376.1-201ENST00000522101 334 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AC021451.1-201ENST00000523498 1129 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AC118942.1-201ENST00000529674 1035 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AC121758.2-201ENST00000553271 193 ntBASIC2.22□□□□□ -2.05
RFC3P40938 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC3P40938 AC007336.1-201ENST00000576365 3828 ntBASIC2.22□□□□□ -2.05
RFC3P40938 MIR3124-201ENST00000582636 67 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AC021749.1-201ENST00000604322 607 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC3P40938 AC019226.1-201ENST00000625666 515 ntBASIC2.22□□□□□ -2.05
RFC3P40938 MIR7515-201ENST00000637837 67 ntBASIC2.22□□□□□ -2.05
RFC3P40938 LINC02211-204ENST00000642024 1070 ntBASIC2.22□□□□□ -2.05
RFC3P40938 DDX43P2-201ENST00000604753 1354 ntBASIC2.22□□□□□ -2.05
RFC3P40938 AC092447.10-201ENST00000620607 1652 ntBASIC2.22□□□□□ -2.05
RFC3P40938 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RFC3P40938 U8.2-201ENST00000363156 134 ntBASIC2.21□□□□□ -2.06
RFC3P40938 RNU6-621P-201ENST00000364752 109 ntBASIC2.21□□□□□ -2.06
RFC3P40938 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RFC3P40938 RPL23AP29-201ENST00000397284 453 ntBASIC2.21□□□□□ -2.06
RFC3P40938 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC3P40938 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.21□□□□□ -2.06
RFC3P40938 HMGB1P49-201ENST00000418882 569 ntBASIC2.21□□□□□ -2.06
RFC3P40938 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RFC3P40938 AL953862.1-201ENST00000423016 168 ntBASIC2.21□□□□□ -2.06
RFC3P40938 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.21□□□□□ -2.06
RFC3P40938 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC3P40938 COX7BP2-201ENST00000437976 242 ntBASIC2.21□□□□□ -2.06
RFC3P40938 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.21□□□□□ -2.06
RFC3P40938 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.21□□□□□ -2.06
RFC3P40938 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.21□□□□□ -2.06
RFC3P40938 EIF4EP3-201ENST00000498782 656 ntBASIC2.21□□□□□ -2.06
RFC3P40938 SCARNA11.3-201ENST00000517276 130 ntBASIC2.21□□□□□ -2.06
RFC3P40938 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.21□□□□□ -2.06
RFC3P40938 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC3P40938 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.21□□□□□ -2.06
RFC3P40938 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC3P40938 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.21□□□□□ -2.06
RFC3P40938 OR4K7P-201ENST00000580232 945 ntBASIC2.21□□□□□ -2.06
RFC3P40938 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
RFC3P40938 MIR3616-201ENST00000584070 92 ntBASIC2.21□□□□□ -2.06
RFC3P40938 AC002545.1-201ENST00000592511 181 ntBASIC2.21□□□□□ -2.06
RFC3P40938 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.21□□□□□ -2.06
RFC3P40938 AL139344.1-201ENST00000605228 195 ntBASIC2.21□□□□□ -2.06
RFC3P40938 AC087241.4-201ENST00000612441 480 ntBASIC2.21□□□□□ -2.06
RFC3P40938 AL121895.2-201ENST00000619558 447 ntBASIC2.21□□□□□ -2.06
RFC3P40938 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC3P40938 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RFC3P40938 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.21□□□□□ -2.06
RFC3P40938 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RFC3P40938 Z82209.1-201ENST00000422141 2135 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AL137003.2-201ENST00000606924 2538 ntBASIC2.2□□□□□ -2.06
RFC3P40938 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RFC3P40938 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.2□□□□□ -2.06
RFC3P40938 SNORA70B-201ENST00000384210 135 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AL162578.1-201ENST00000406202 378 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms