Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.51□□□□□ -1.85
TM4SF1P30408 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM4SF1P30408 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM4SF1P30408 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM4SF1P30408 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TM4SF1P30408 SNORD115.1-201ENST00000391109 76 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 AC078974.1-201ENST00000411597 223 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.51□□□□□ -1.85
TM4SF1P30408 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.51□□□□□ -1.85
TM4SF1P30408 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.51□□□□□ -1.85
TM4SF1P30408 AL590664.1-201ENST00000448065 339 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.51□□□□□ -1.85
TM4SF1P30408 RPL37P6-201ENST00000460682 294 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TM4SF1P30408 AC117522.3-201ENST00000507974 584 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 AC008549.1-201ENST00000512900 643 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 RNU6-1256P-201ENST00000516539 103 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.51□□□□□ -1.85
TM4SF1P30408 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.51□□□□□ -1.85
TM4SF1P30408 AC093012.1-202ENST00000549403 582 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 AL163153.1-201ENST00000554223 283 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.51□□□□□ -1.85
TM4SF1P30408 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.51□□□□□ -1.85
TM4SF1P30408 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.51□□□□□ -1.85
TM4SF1P30408 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.51□□□□□ -1.85
TM4SF1P30408 AL355472.4-201ENST00000610233 626 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 SNHG22-203ENST00000617833 660 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 AC025048.6-202ENST00000627667 438 ntBASIC3.51□□□□□ -1.85
TM4SF1P30408 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TM4SF1P30408 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM4SF1P30408 OR56A5-201ENST00000340110 738 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 SNORD56.3-201ENST00000363507 71 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TM4SF1P30408 SNORA26.8-201ENST00000391306 124 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 AL021407.1-201ENST00000404531 386 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 RNA5SP274-201ENST00000410484 108 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.5□□□□□ -1.85
TM4SF1P30408 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.5□□□□□ -1.85
TM4SF1P30408 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.5□□□□□ -1.85
TM4SF1P30408 TIMM9P1-201ENST00000436122 256 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 COX6CP12-201ENST00000446748 202 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 EPS15P1-201ENST00000448836 336 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.5□□□□□ -1.85
TM4SF1P30408 AC092754.2-201ENST00000463506 460 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.5□□□□□ -1.85
TM4SF1P30408 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.5□□□□□ -1.85
TM4SF1P30408 ATP5F1P5-201ENST00000526403 760 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TM4SF1P30408 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TM4SF1P30408 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.5□□□□□ -1.85
TM4SF1P30408 ZNF519P3-201ENST00000557158 1032 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 MIR5697-201ENST00000578045 78 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 SNORD53-201ENST00000579969 78 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.5□□□□□ -1.85
TM4SF1P30408 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 AC108479.2-201ENST00000617314 601 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 FRG1KP-201ENST00000623592 341 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.5□□□□□ -1.85
TM4SF1P30408 AC064859.1-201ENST00000624741 174 ntBASIC3.5□□□□□ -1.85
TM4SF1P30408 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.5□□□□□ -1.85
TM4SF1P30408 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TM4SF1P30408 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.49□□□□□ -1.85
TM4SF1P30408 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TM4SF1P30408 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TM4SF1P30408 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TM4SF1P30408 RNU6-741P-201ENST00000383889 107 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 Y_RNA.598-201ENST00000410480 95 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 RNA5SP107-201ENST00000411358 122 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.49□□□□□ -1.85
TM4SF1P30408 RPS7P13-201ENST00000413955 498 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 RPL32P35-201ENST00000415214 394 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 NEK4P1-201ENST00000433383 879 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.49□□□□□ -1.85
TM4SF1P30408 COX6CP2-201ENST00000444980 225 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.49□□□□□ -1.85
TM4SF1P30408 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.49□□□□□ -1.85
TM4SF1P30408 AL359385.1-201ENST00000456509 365 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.49□□□□□ -1.85
TM4SF1P30408 AC100870.1-201ENST00000522035 505 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 AC087373.1-201ENST00000524920 491 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TM4SF1P30408 AC123904.3-201ENST00000547218 814 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.49□□□□□ -1.85
TM4SF1P30408 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.49□□□□□ -1.85
TM4SF1P30408 MIR3146-201ENST00000580367 79 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 U73023.1-201ENST00000603134 700 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 AC112191.3-201ENST00000604371 277 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 AC245517.5-201ENST00000611529 162 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.49□□□□□ -1.85
TM4SF1P30408 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.49□□□□□ -1.85
TM4SF1P30408 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
TM4SF1P30408 PWAR6-201ENST00000552334 4618 ntBASIC3.49□□□□□ -1.85
TM4SF1P30408 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TM4SF1P30408 ASNSP3-201ENST00000451989 1306 ntBASIC3.48□□□□□ -1.85
TM4SF1P30408 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TM4SF1P30408 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms