Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 HMGN2P30-201ENST00000423237 256 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.67□□□□□ -2.14
COL4A5P29400 LSM1P1-201ENST00000438629 273 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.67□□□□□ -2.14
COL4A5P29400 AC015724.1-201ENST00000478577 156 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL4A5P29400 AL359273.1-201ENST00000510918 627 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.67□□□□□ -2.14
COL4A5P29400 RNU6-56P-201ENST00000516986 93 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A5P29400 MTCO3P24-201ENST00000572729 782 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.67□□□□□ -2.14
COL4A5P29400 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.67□□□□□ -2.14
COL4A5P29400 AC002487.1-201ENST00000604565 994 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AC106900.2-201ENST00000604994 317 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.67□□□□□ -2.14
COL4A5P29400 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL4A5P29400 CDC27P3-201ENST00000635418 1910 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
COL4A5P29400 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL4A5P29400 AL596028.1-201ENST00000326971 197 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 RNU6-252P-201ENST00000363232 107 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 MIR649-201ENST00000384843 97 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 MIR320A-201ENST00000385302 82 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AC096533.1-201ENST00000411645 353 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A5P29400 AL589880.1-201ENST00000448271 287 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.67□□□□□ -2.14
COL4A5P29400 BX248409.1-201ENST00000455497 255 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.67□□□□□ -2.14
COL4A5P29400 COX6CP14-201ENST00000469580 174 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.67□□□□□ -2.14
COL4A5P29400 AC023813.2-201ENST00000564321 469 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 FAM60BP-201ENST00000578364 658 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.67□□□□□ -2.14
COL4A5P29400 AC092474.3-201ENST00000603022 568 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 DUXAP4-201ENST00000603046 613 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 MIR6788-201ENST00000618842 66 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.66□□□□□ -2.14
COL4A5P29400 AC099654.7-201ENST00000635788 2127 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL4A5P29400 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COL4A5P29400 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL4A5P29400 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
COL4A5P29400 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.66□□□□□ -2.14
COL4A5P29400 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.66□□□□□ -2.14
COL4A5P29400 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.66□□□□□ -2.14
COL4A5P29400 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.66□□□□□ -2.14
COL4A5P29400 RAB11AP1-201ENST00000442978 646 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 Z96811.1-201ENST00000445880 108 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 AIG1P1-201ENST00000503376 148 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.66□□□□□ -2.14
COL4A5P29400 AC087373.1-201ENST00000524920 491 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.66□□□□□ -2.14
COL4A5P29400 AC012414.2-201ENST00000559474 187 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.66□□□□□ -2.14
COL4A5P29400 AC008739.2-201ENST00000597006 317 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 AC025588.3-201ENST00000604182 274 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 BNIP3P4-201ENST00000604946 565 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 AC010738.1-201ENST00000604970 987 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 AC016542.1-201ENST00000608259 493 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 MIR6078-201ENST00000611069 100 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 AC073968.1-201ENST00000618594 637 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.66□□□□□ -2.14
COL4A5P29400 AL513185.3-201ENST00000433335 1300 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 AC011477.1-204ENST00000623416 1325 ntBASIC1.66□□□□□ -2.14
COL4A5P29400 SNORD56.5-201ENST00000364281 72 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 SNORD51.1-201ENST00000365405 77 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 RNU2-32P-201ENST00000411193 191 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 UBE2D3P2-201ENST00000424409 445 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 RPS6P14-201ENST00000425165 719 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 SUMO1P4-201ENST00000429430 302 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 OR10R1P-201ENST00000441524 1141 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 COX6CP12-201ENST00000446748 202 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 AC104073.1-201ENST00000451988 151 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.65□□□□□ -2.15
COL4A5P29400 VPS26AP1-201ENST00000483197 979 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 RPL21P131-201ENST00000497298 483 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
COL4A5P29400 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
COL4A5P29400 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
COL4A5P29400 AC096571.1-202ENST00000506634 735 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 OR5BM1P-201ENST00000512021 366 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
COL4A5P29400 AP003033.1-201ENST00000527244 415 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 ZNF705CP-201ENST00000530515 889 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 NBEAP1-201ENST00000554452 979 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 MED28P6-201ENST00000558776 231 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 BPTFP1-201ENST00000579209 492 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 BX322635.1-201ENST00000605804 496 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 AP001033.2-201ENST00000609701 1003 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 AC006329.2-201ENST00000611491 394 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.65□□□□□ -2.15
COL4A5P29400 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.65□□□□□ -2.15
COL4A5P29400 ZNF663P-202ENST00000641770 1131 ntBASIC1.65□□□□□ -2.15
COL4A5P29400 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.65□□□□□ -2.15
COL4A5P29400 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
COL4A5P29400 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
COL4A5P29400 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.64□□□□□ -2.15
COL4A5P29400 RNU6-339P-201ENST00000384310 107 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms