Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC034102.8-201ENST00000615146 484 ntBASIC2.17□□□□□ -2.06
USF1P22415 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.17□□□□□ -2.06
USF1P22415 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.17□□□□□ -2.06
USF1P22415 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USF1P22415 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.17□□□□□ -2.06
USF1P22415 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USF1P22415 RNU6-461P-201ENST00000364195 107 ntBASIC2.16□□□□□ -2.06
USF1P22415 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.16□□□□□ -2.06
USF1P22415 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
USF1P22415 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.16□□□□□ -2.06
USF1P22415 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.16□□□□□ -2.06
USF1P22415 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.16□□□□□ -2.06
USF1P22415 UBE2D3P1-201ENST00000436669 444 ntBASIC2.16□□□□□ -2.06
USF1P22415 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
USF1P22415 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.16□□□□□ -2.06
USF1P22415 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.16□□□□□ -2.06
USF1P22415 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 ANXA2P1-201ENST00000505539 926 ntBASIC2.16□□□□□ -2.06
USF1P22415 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 AP003122.3-201ENST00000526316 255 ntBASIC2.16□□□□□ -2.06
USF1P22415 COX6CP5-201ENST00000527162 228 ntBASIC2.16□□□□□ -2.06
USF1P22415 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 AC090079.2-201ENST00000575289 768 ntBASIC2.16□□□□□ -2.06
USF1P22415 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.16□□□□□ -2.06
USF1P22415 AC090186.1-201ENST00000605991 572 ntBASIC2.16□□□□□ -2.06
USF1P22415 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.16□□□□□ -2.06
USF1P22415 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.16□□□□□ -2.06
USF1P22415 SDR42E1P2-201ENST00000614861 481 ntBASIC2.16□□□□□ -2.06
USF1P22415 AP002371.2-201ENST00000624450 503 ntBASIC2.16□□□□□ -2.06
USF1P22415 AC004808.1-201ENST00000627671 721 ntBASIC2.16□□□□□ -2.06
USF1P22415 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
USF1P22415 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USF1P22415 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.16□□□□□ -2.06
USF1P22415 AC080100.1-201ENST00000624239 5356 ntBASIC2.15□□□□□ -2.06
USF1P22415 AL355596.1-201ENST00000565399 3996 ntBASIC2.15□□□□□ -2.06
USF1P22415 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
USF1P22415 SNORA67.1-201ENST00000364749 141 ntBASIC2.15□□□□□ -2.07
USF1P22415 RN7SKP226-201ENST00000364912 300 ntBASIC2.15□□□□□ -2.07
USF1P22415 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.15□□□□□ -2.07
USF1P22415 RNU6-432P-201ENST00000384196 109 ntBASIC2.15□□□□□ -2.07
USF1P22415 MIR888-201ENST00000401186 77 ntBASIC2.15□□□□□ -2.07
USF1P22415 ERHP2-201ENST00000402323 299 ntBASIC2.15□□□□□ -2.07
USF1P22415 AL136310.1-201ENST00000404926 654 ntBASIC2.15□□□□□ -2.07
USF1P22415 MTATP6P20-201ENST00000414147 562 ntBASIC2.15□□□□□ -2.07
USF1P22415 MTCYBP38-201ENST00000417160 1123 ntBASIC2.15□□□□□ -2.07
USF1P22415 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.15□□□□□ -2.07
USF1P22415 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.15□□□□□ -2.07
USF1P22415 ATP5F1P1-201ENST00000433775 569 ntBASIC2.15□□□□□ -2.07
USF1P22415 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.15□□□□□ -2.07
USF1P22415 AL445687.1-201ENST00000439946 251 ntBASIC2.15□□□□□ -2.07
USF1P22415 OR10R1P-201ENST00000441524 1141 ntBASIC2.15□□□□□ -2.07
USF1P22415 PAXBP1P1-201ENST00000449315 447 ntBASIC2.15□□□□□ -2.07
USF1P22415 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.15□□□□□ -2.07
USF1P22415 USP9YP10-201ENST00000454868 628 ntBASIC2.15□□□□□ -2.07
USF1P22415 UBL5P3-201ENST00000475112 231 ntBASIC2.15□□□□□ -2.07
USF1P22415 RPL36AP51-201ENST00000487216 318 ntBASIC2.15□□□□□ -2.07
USF1P22415 HMGB1P36-201ENST00000487709 576 ntBASIC2.15□□□□□ -2.07
USF1P22415 AC135721.1-201ENST00000497954 479 ntBASIC2.15□□□□□ -2.07
USF1P22415 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.15□□□□□ -2.07
USF1P22415 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.15□□□□□ -2.07
USF1P22415 AC008549.1-201ENST00000512900 643 ntBASIC2.15□□□□□ -2.07
USF1P22415 RN7SKP24-201ENST00000515888 284 ntBASIC2.15□□□□□ -2.07
USF1P22415 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.15□□□□□ -2.07
USF1P22415 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.15□□□□□ -2.07
USF1P22415 AC027176.1-201ENST00000560204 514 ntBASIC2.15□□□□□ -2.07
USF1P22415 AC009712.1-201ENST00000564938 316 ntBASIC2.15□□□□□ -2.07
USF1P22415 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.15□□□□□ -2.07
USF1P22415 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.15□□□□□ -2.07
USF1P22415 TPMTP1-201ENST00000592307 737 ntBASIC2.15□□□□□ -2.07
USF1P22415 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.15□□□□□ -2.07
USF1P22415 AC006270.3-201ENST00000605967 1036 ntBASIC2.15□□□□□ -2.07
USF1P22415 AC131235.4-201ENST00000609288 620 ntBASIC2.15□□□□□ -2.07
USF1P22415 AC245297.2-201ENST00000610119 565 ntBASIC2.15□□□□□ -2.07
USF1P22415 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.15□□□□□ -2.07
USF1P22415 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
USF1P22415 AC099063.3-201ENST00000642066 185 ntBASIC2.15□□□□□ -2.07
USF1P22415 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.15□□□□□ -2.07
USF1P22415 ZNF271P-202ENST00000465539 1970 ntBASIC2.14□□□□□ -2.07
USF1P22415 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USF1P22415 RNU6-289P-201ENST00000364093 107 ntBASIC2.14□□□□□ -2.07
USF1P22415 MIR144-201ENST00000384886 86 ntBASIC2.14□□□□□ -2.07
USF1P22415 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USF1P22415 RN7SKP192-201ENST00000411291 327 ntBASIC2.14□□□□□ -2.07
USF1P22415 USP9YP33-201ENST00000412220 421 ntBASIC2.14□□□□□ -2.07
USF1P22415 HMGB1P49-201ENST00000418882 569 ntBASIC2.14□□□□□ -2.07
USF1P22415 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.14□□□□□ -2.07
USF1P22415 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.14□□□□□ -2.07
USF1P22415 USP9YP35-201ENST00000435696 412 ntBASIC2.14□□□□□ -2.07
USF1P22415 AC010095.1-201ENST00000443543 144 ntBASIC2.14□□□□□ -2.07
USF1P22415 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.14□□□□□ -2.07
USF1P22415 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.14□□□□□ -2.07
USF1P22415 DPPA3P1-201ENST00000448050 469 ntBASIC2.14□□□□□ -2.07
USF1P22415 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.14□□□□□ -2.07
USF1P22415 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.14□□□□□ -2.07
USF1P22415 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms