Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH3P22223 MIR3200-201ENST00000580767 85 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AC012493.2-201ENST00000595083 291 ntBASIC3.12□□□□□ -1.91
CDH3P22223 SEPT7P9-203ENST00000604116 343 ntBASIC3.12□□□□□ -1.91
CDH3P22223 YPEL5P2-201ENST00000605553 359 ntBASIC3.12□□□□□ -1.91
CDH3P22223 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH3P22223 BX664608.1-201ENST00000610519 487 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AC245517.5-201ENST00000611529 162 ntBASIC3.12□□□□□ -1.91
CDH3P22223 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AC091304.9-201ENST00000612091 226 ntBASIC3.12□□□□□ -1.91
CDH3P22223 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH3P22223 AC004696.1-201ENST00000614345 607 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH3P22223 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AC008250.2-201ENST00000615261 205 ntBASIC3.12□□□□□ -1.91
CDH3P22223 MIR8057-201ENST00000620957 69 ntBASIC3.12□□□□□ -1.91
CDH3P22223 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH3P22223 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH3P22223 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CDH3P22223 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.12□□□□□ -1.91
CDH3P22223 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CDH3P22223 AL353743.1-202ENST00000431724 1695 ntBASIC3.11□□□□□ -1.91
CDH3P22223 DDX10P1-201ENST00000448545 1933 ntBASIC3.11□□□□□ -1.91
CDH3P22223 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH3P22223 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH3P22223 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH3P22223 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
CDH3P22223 RNU4-1-201ENST00000363925 141 ntBASIC3.11□□□□□ -1.91
CDH3P22223 RNY4P16-201ENST00000364768 94 ntBASIC3.11□□□□□ -1.91
CDH3P22223 SNORA23-201ENST00000365128 182 ntBASIC3.11□□□□□ -1.91
CDH3P22223 Y_RNA.359-201ENST00000365498 102 ntBASIC3.11□□□□□ -1.91
CDH3P22223 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH3P22223 SNORA36C-201ENST00000384289 132 ntBASIC3.11□□□□□ -1.91
CDH3P22223 MIR23A-201ENST00000385245 73 ntBASIC3.11□□□□□ -1.91
CDH3P22223 MIR887-201ENST00000401258 79 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AL109755.1-201ENST00000401791 649 ntBASIC3.11□□□□□ -1.91
CDH3P22223 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH3P22223 UBE2FP1-201ENST00000416536 447 ntBASIC3.11□□□□□ -1.91
CDH3P22223 RPL7P10-201ENST00000417407 739 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AL589872.1-201ENST00000426602 288 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH3P22223 SAR1AP4-201ENST00000429225 591 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH3P22223 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH3P22223 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH3P22223 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH3P22223 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH3P22223 AL033528.1-201ENST00000453780 140 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH3P22223 RN7SL863P-201ENST00000462370 296 ntBASIC3.11□□□□□ -1.91
CDH3P22223 RAP1BP2-201ENST00000478270 544 ntBASIC3.11□□□□□ -1.91
CDH3P22223 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH3P22223 MTND1P3-201ENST00000484956 952 ntBASIC3.11□□□□□ -1.91
CDH3P22223 RPS15AP36-201ENST00000492022 382 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH3P22223 VN1R104P-201ENST00000505115 1009 ntBASIC3.11□□□□□ -1.91
CDH3P22223 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH3P22223 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CDH3P22223 AP002963.1-201ENST00000530590 184 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AP002453.2-201ENST00000533503 320 ntBASIC3.11□□□□□ -1.91
CDH3P22223 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH3P22223 RPL21P12-201ENST00000559810 515 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH3P22223 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
CDH3P22223 MTCYBP33-201ENST00000575007 1130 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AC105224.1-201ENST00000587055 421 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.11□□□□□ -1.91
CDH3P22223 AC078899.3-201ENST00000599065 212 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AC121334.2-201ENST00000605387 271 ntBASIC3.11□□□□□ -1.91
CDH3P22223 RNU6-87P-201ENST00000607561 108 ntBASIC3.11□□□□□ -1.91
CDH3P22223 AC108479.2-201ENST00000617314 601 ntBASIC3.11□□□□□ -1.91
CDH3P22223 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH3P22223 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH3P22223 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
CDH3P22223 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH3P22223 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH3P22223 U8.9-201ENST00000365667 134 ntBASIC3.1□□□□□ -1.91
CDH3P22223 DEFB108C-201ENST00000400154 252 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH3P22223 CDK8P2-201ENST00000415020 547 ntBASIC3.1□□□□□ -1.91
CDH3P22223 SPA17P1-201ENST00000416656 452 ntBASIC3.1□□□□□ -1.91
CDH3P22223 MORF4L1P6-201ENST00000418771 268 ntBASIC3.1□□□□□ -1.91
CDH3P22223 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH3P22223 CYCSP32-201ENST00000440548 321 ntBASIC3.1□□□□□ -1.91
CDH3P22223 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH3P22223 LARP1BP2-201ENST00000486594 519 ntBASIC3.1□□□□□ -1.91
CDH3P22223 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH3P22223 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH3P22223 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH3P22223 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH3P22223 RNU2-46P-201ENST00000517038 113 ntBASIC3.1□□□□□ -1.91
CDH3P22223 RNU6-64P-201ENST00000517119 105 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH3P22223 DEFB108A-201ENST00000530110 222 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH3P22223 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH3P22223 MIR5004-201ENST00000579078 107 ntBASIC3.1□□□□□ -1.91
CDH3P22223 MIR4293-201ENST00000584305 78 ntBASIC3.1□□□□□ -1.91
CDH3P22223 MIR3611-201ENST00000584484 83 ntBASIC3.1□□□□□ -1.91
CDH3P22223 AC040904.1-201ENST00000590850 223 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms