Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ATP5HP2-201ENST00000433885 485 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 RNU7-152P-201ENST00000458982 64 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 DYNLL1P5-201ENST00000467158 270 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AL132838.2-201ENST00000492041 314 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 MTND5P5-201ENST00000503764 376 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN1P18031 RNU6-352P-201ENST00000516908 107 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 RNU4-60P-201ENST00000517239 135 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AC090281.1-201ENST00000523019 276 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 COPS8P3-201ENST00000526024 482 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 APOOP3-201ENST00000536787 586 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AL163153.1-201ENST00000554223 283 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN1P18031 BNIP3P5-201ENST00000562290 498 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN1P18031 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 AC023043.2-201ENST00000589678 1026 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AC006116.10-201ENST00000591836 581 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN1P18031 AC104763.2-201ENST00000604179 382 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AP001836.1-201ENST00000604675 523 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AC124303.1-201ENST00000605703 360 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN1P18031 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN1P18031 U2.17-201ENST00000611454 95 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AL359547.2-201ENST00000615810 418 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN1P18031 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN1P18031 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN1P18031 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN1P18031 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTPN1P18031 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PTPN1P18031 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PTPN1P18031 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN1P18031 Y_RNA.126-201ENST00000363382 111 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN1P18031 Y_RNA.399-201ENST00000383955 105 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 SNORD3H-201ENST00000384486 214 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 SNORA75.4-201ENST00000391278 119 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 RPL21P65-201ENST00000406094 466 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 RPL5P18-201ENST00000406671 891 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 RNA5SP39-201ENST00000411245 120 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN1P18031 AL117339.2-201ENST00000430475 180 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN1P18031 HLA-N-201ENST00000437516 135 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN1P18031 AC130509.1-201ENST00000464158 433 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN1P18031 AP001086.1-201ENST00000494882 321 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 Y_RNA.689-201ENST00000516589 107 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 RNU7-143P-201ENST00000516781 65 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 RNU6-677P-201ENST00000516914 101 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 RN7SKP60-201ENST00000516985 239 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 RNU6-840P-201ENST00000517275 65 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN1P18031 IFITM8P-201ENST00000522529 394 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 ELOCP31-201ENST00000540463 467 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AC090115.3-201ENST00000553218 849 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN1P18031 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN1P18031 CYP4A43P-201ENST00000568156 121 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 HNRNPCP4-201ENST00000571636 900 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AC007151.1-201ENST00000572774 483 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AC138761.3-201ENST00000579993 334 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 MIR5684-201ENST00000585074 65 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AC006504.6-201ENST00000590142 199 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 SNRPGP17-201ENST00000603780 214 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 DPPA3P3-201ENST00000603842 430 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 ATP1B3P1-201ENST00000605365 821 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 AL080274.1-201ENST00000605565 220 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 SDR42E1P2-201ENST00000614861 481 ntBASIC4.34□□□□□ -1.71
PTPN1P18031 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN1P18031 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN1P18031 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN1P18031 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN1P18031 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN1P18031 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
PTPN1P18031 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.34□□□□□ -1.72
PTPN1P18031 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PTPN1P18031 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
PTPN1P18031 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN1P18031 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN1P18031 Z73965.1-201ENST00000623412 2297 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 MTCO1P12-201ENST00000414273 1543 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 SNORA60-201ENST00000362396 134 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 RNA5SP283-201ENST00000365604 119 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 RNU6-393P-201ENST00000384475 107 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 SNORA37-201ENST00000384504 129 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 SNORA16.2-201ENST00000390991 127 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 CISD1P1-201ENST00000393907 327 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 MIR450B-201ENST00000401182 78 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN1P18031 RNU6-1304P-201ENST00000411374 106 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 FABP5P14-201ENST00000437273 393 ntBASIC4.33□□□□□ -1.72
PTPN1P18031 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms