| MUC1 | P15941 | AC026904.2-201 | ENST00000521359 | 537 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | MTERF3-203 | ENST00000522822 | 1148 nt | TSL 2 BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | NAP1L1P1-201 | ENST00000524793 | 1063 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | ZDHHC20P3-201 | ENST00000531576 | 336 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC243972.3-201 | ENST00000539655 | 198 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL132819.1-201 | ENST00000555595 | 208 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | MIR5694-201 | ENST00000581190 | 76 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC024563.1-202 | ENST00000597533 | 419 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | TUG1_1.1-201 | ENST00000610654 | 145 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC245517.5-201 | ENST00000611529 | 162 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL031667.3-201 | ENST00000620124 | 655 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC131159.1-201 | ENST00000621854 | 213 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC095031.1-201 | ENST00000623685 | 672 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | DNAH7-201 | ENST00000312428 | 12394 nt | APPRIS P1 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC007336.1-201 | ENST00000576365 | 3828 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | ZNF736P9Y-201 | ENST00000439586 | 1345 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC012321.1-201 | ENST00000561622 | 1588 nt | BASIC | 2.15 | □□□□□ -2.06 | | |
| MUC1 | P15941 | MTND4P16-201 | ENST00000466108 | 1367 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | KLRF1-202 | ENST00000354855 | 838 nt | TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNU6-97P-201 | ENST00000363387 | 104 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNU6-660P-201 | ENST00000364566 | 109 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | Y_RNA.302-201 | ENST00000364997 | 102 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | U8.8-201 | ENST00000365399 | 135 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | MDM4-202 | ENST00000367180 | 547 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RABGGTB-202 | ENST00000370826 | 512 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNU6-253P-201 | ENST00000384730 | 105 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | MIR27B-201 | ENST00000385129 | 97 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL122016.1-201 | ENST00000403365 | 367 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RPS3AP24-201 | ENST00000407896 | 734 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | FGF12-AS1-201 | ENST00000414920 | 580 nt | TSL 4 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | LHFPL3-AS1-203 | ENST00000417290 | 950 nt | TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | USP9YP27-201 | ENST00000418455 | 438 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | DNAJA1P2-201 | ENST00000421360 | 1197 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | UBE2D3P2-201 | ENST00000424409 | 445 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | LINC02532-205 | ENST00000430094 | 628 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | THAP5P1-201 | ENST00000439089 | 262 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RPS12P2-201 | ENST00000439728 | 269 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC009299.3-202 | ENST00000445372 | 538 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC013727.2-201 | ENST00000447761 | 545 nt | TSL 4 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | PAXBP1P1-201 | ENST00000449315 | 447 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL109933.2-201 | ENST00000452651 | 260 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | CACYBPP2-201 | ENST00000453625 | 678 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | SNORD121B-201 | ENST00000458838 | 81 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AP001486.1-201 | ENST00000463339 | 476 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC104563.1-201 | ENST00000476147 | 376 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL049873.1-201 | ENST00000480540 | 376 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | LINC00888-204 | ENST00000487386 | 421 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | LINC02465-201 | ENST00000507099 | 532 nt | TSL 4 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC093809.1-201 | ENST00000509155 | 340 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC005150.1-201 | ENST00000512831 | 628 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC027335.1-201 | ENST00000515377 | 543 nt | TSL 4 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNA5SP216-201 | ENST00000516111 | 123 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | NDST1-AS1-201 | ENST00000519040 | 368 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC022690.1-201 | ENST00000526681 | 550 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC087276.1-201 | ENST00000529659 | 480 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL391156.1-201 | ENST00000554965 | 554 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | LINC02290-203 | ENST00000556662 | 577 nt | TSL 4 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL133368.2-201 | ENST00000556978 | 386 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL442163.1-201 | ENST00000557251 | 515 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC023824.4-201 | ENST00000562572 | 476 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | HMGB1P6-201 | ENST00000569046 | 646 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | ANKRD36BP2-206 | ENST00000575193 | 1245 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | LINC01893-201 | ENST00000581750 | 479 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC096708.3-201 | ENST00000584226 | 559 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC008277.1-203 | ENST00000594921 | 1149 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC008751.2-201 | ENST00000597885 | 980 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AP000811.1-201 | ENST00000603803 | 651 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | NUTF2P8-201 | ENST00000604593 | 363 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC022017.1-201 | ENST00000608793 | 559 nt | TSL 4 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC103710.4-201 | ENST00000609301 | 899 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | SOX2OT_exon1.1-201 | ENST00000614902 | 232 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | ST7-OT4_4.1-201 | ENST00000614993 | 213 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL450472.3-201 | ENST00000615578 | 367 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | WFDC11-203 | ENST00000618797 | 561 nt | APPRIS P1 TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AP000676.3-201 | ENST00000623299 | 569 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | SPAM1-202 | ENST00000340011 | 2349 nt | APPRIS P4 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | PRKACB-204 | ENST00000370685 | 4481 nt | APPRIS P4 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | CUL1P1-201 | ENST00000509510 | 2425 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC009812.4-201 | ENST00000569134 | 1805 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | QSER1-204 | ENST00000527788 | 5052 nt | TSL 2 BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | SAMD9L-201 | ENST00000318238 | 7134 nt | APPRIS P1 TSL 1 (best) BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | PMCH-201 | ENST00000329406 | 766 nt | APPRIS P1 TSL 1 (best) BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNU6-359P-201 | ENST00000365466 | 108 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | SNORA6-201 | ENST00000384033 | 151 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNU6-114P-201 | ENST00000384704 | 105 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | MRPL30-202 | ENST00000409145 | 562 nt | TSL 2 BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RN7SKP266-201 | ENST00000410232 | 287 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNU2-43P-201 | ENST00000410306 | 190 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RPS15AP38-201 | ENST00000413110 | 372 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AF274854.1-201 | ENST00000413236 | 615 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL158834.1-201 | ENST00000419441 | 466 nt | TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC092427.1-202 | ENST00000430569 | 476 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RPL7P34-201 | ENST00000433316 | 712 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | UBE2D3P1-201 | ENST00000436669 | 444 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC004866.2-201 | ENST00000438285 | 481 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL357793.2-201 | ENST00000447056 | 850 nt | TSL 3 BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC021382.1-201 | ENST00000483523 | 359 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC097478.1-204 | ENST00000509723 | 547 nt | TSL 3 BASIC | 2.14 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC108517.1-201 | ENST00000512546 | 327 nt | TSL 3 BASIC | 2.14 | □□□□□ -2.07 | | |