Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 FRG1CP-201ENST00000358464 769 ntBASIC3.4□□□□□ -1.87
PCNAP12004 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
PCNAP12004 RNU6-50P-201ENST00000362356 103 ntBASIC3.4□□□□□ -1.87
PCNAP12004 Y_RNA.367-201ENST00000365544 101 ntBASIC3.4□□□□□ -1.87
PCNAP12004 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCNAP12004 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PCNAP12004 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 RNU6-641P-201ENST00000384006 107 ntBASIC3.4□□□□□ -1.87
PCNAP12004 RNU6-74P-201ENST00000384235 107 ntBASIC3.4□□□□□ -1.87
PCNAP12004 RPL21P17-201ENST00000397467 475 ntBASIC3.4□□□□□ -1.87
PCNAP12004 AL354719.1-201ENST00000406535 843 ntBASIC3.4□□□□□ -1.87
PCNAP12004 RNU6ATAC-201ENST00000408749 126 ntBASIC3.4□□□□□ -1.87
PCNAP12004 RNU6-648P-201ENST00000410190 107 ntBASIC3.4□□□□□ -1.87
PCNAP12004 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 ATP5A1P2-201ENST00000412323 255 ntBASIC3.4□□□□□ -1.87
PCNAP12004 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 RPL27AP8-201ENST00000424277 446 ntBASIC3.4□□□□□ -1.87
PCNAP12004 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 AC091390.3-201ENST00000426478 338 ntBASIC3.4□□□□□ -1.87
PCNAP12004 ISCA1P1-201ENST00000426679 387 ntBASIC3.4□□□□□ -1.87
PCNAP12004 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 Z99127.3-201ENST00000448158 395 ntBASIC3.4□□□□□ -1.87
PCNAP12004 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 MTND2P24-201ENST00000453434 806 ntBASIC3.4□□□□□ -1.87
PCNAP12004 AC093899.1-201ENST00000457984 376 ntBASIC3.4□□□□□ -1.87
PCNAP12004 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.4□□□□□ -1.87
PCNAP12004 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 RN7SKP13-201ENST00000515933 244 ntBASIC3.4□□□□□ -1.87
PCNAP12004 RNU6-410P-201ENST00000517006 107 ntBASIC3.4□□□□□ -1.87
PCNAP12004 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 MTND1P5-201ENST00000517906 940 ntBASIC3.4□□□□□ -1.87
PCNAP12004 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.4□□□□□ -1.87
PCNAP12004 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
PCNAP12004 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.4□□□□□ -1.87
PCNAP12004 AL020997.2-201ENST00000602607 184 ntBASIC3.4□□□□□ -1.87
PCNAP12004 AL359880.1-201ENST00000621879 266 ntBASIC3.4□□□□□ -1.87
PCNAP12004 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCNAP12004 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.4□□□□□ -1.87
PCNAP12004 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCNAP12004 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
PCNAP12004 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.39□□□□□ -1.87
PCNAP12004 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
PCNAP12004 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.39□□□□□ -1.87
PCNAP12004 ZNF285B-201ENST00000561698 1767 ntBASIC3.39□□□□□ -1.87
PCNAP12004 SNORA73.2-201ENST00000364946 201 ntBASIC3.39□□□□□ -1.87
PCNAP12004 RNU6-108P-201ENST00000365558 107 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
PCNAP12004 MIR493-201ENST00000385254 89 ntBASIC3.39□□□□□ -1.87
PCNAP12004 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PCNAP12004 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PCNAP12004 RN7SKP53-201ENST00000411337 315 ntBASIC3.39□□□□□ -1.87
PCNAP12004 FCF1P9-201ENST00000412546 282 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC114491.1-201ENST00000416095 246 ntBASIC3.39□□□□□ -1.87
PCNAP12004 MTATP6P18-201ENST00000417994 673 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC068533.1-201ENST00000418542 415 ntBASIC3.39□□□□□ -1.87
PCNAP12004 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.39□□□□□ -1.87
PCNAP12004 RAC1P6-201ENST00000423911 575 ntBASIC3.39□□□□□ -1.87
PCNAP12004 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.39□□□□□ -1.87
PCNAP12004 RPL23AP69-201ENST00000431134 458 ntBASIC3.39□□□□□ -1.87
PCNAP12004 MTATP6P16-201ENST00000434543 526 ntBASIC3.39□□□□□ -1.87
PCNAP12004 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCNAP12004 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.39□□□□□ -1.87
PCNAP12004 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.39□□□□□ -1.87
PCNAP12004 AC020550.1-201ENST00000447385 163 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCNAP12004 PSPHP1-201ENST00000450062 261 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC013267.1-201ENST00000458227 267 ntBASIC3.39□□□□□ -1.87
PCNAP12004 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.39□□□□□ -1.87
PCNAP12004 AC023598.1-201ENST00000472521 361 ntBASIC3.39□□□□□ -1.87
PCNAP12004 ARL4AP2-201ENST00000507378 601 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC009646.1-201ENST00000510455 318 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC104619.4-201ENST00000510773 249 ntBASIC3.39□□□□□ -1.87
PCNAP12004 RNU6-718P-201ENST00000516166 105 ntBASIC3.39□□□□□ -1.87
PCNAP12004 RNU6-1256P-201ENST00000516539 103 ntBASIC3.39□□□□□ -1.87
PCNAP12004 RNU6-1092P-201ENST00000516955 87 ntBASIC3.39□□□□□ -1.87
PCNAP12004 NRON-201ENST00000517270 370 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.39□□□□□ -1.87
PCNAP12004 AC103843.2-201ENST00000530523 682 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.39□□□□□ -1.87
PCNAP12004 AK6P1-201ENST00000540219 478 ntBASIC3.39□□□□□ -1.87
PCNAP12004 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PCNAP12004 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.39□□□□□ -1.87
PCNAP12004 AC037471.2-201ENST00000564941 598 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.39□□□□□ -1.87
PCNAP12004 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.39□□□□□ -1.87
PCNAP12004 AL133393.1-201ENST00000603277 287 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AP001596.2-201ENST00000608410 312 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AP002826.1-201ENST00000608835 315 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms