Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CD28P10747 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 AC023538.1-201ENST00000534576 736 ntBASIC1.95□□□□□ -2.1
CD28P10747 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CD28P10747 AC004486.1-201ENST00000546846 233 ntBASIC1.95□□□□□ -2.1
CD28P10747 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.95□□□□□ -2.1
CD28P10747 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 MIR3670-2-201ENST00000582974 65 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 MIR3670-1-201ENST00000584160 65 ntBASIC1.95□□□□□ -2.1
CD28P10747 MIR3670-3-201ENST00000584855 65 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.95□□□□□ -2.1
CD28P10747 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.95□□□□□ -2.1
CD28P10747 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.95□□□□□ -2.1
CD28P10747 AL592221.1-201ENST00000605266 382 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 MIR3670-4-201ENST00000612260 65 ntBASIC1.95□□□□□ -2.1
CD28P10747 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CD28P10747 TUG1_2.1-201ENST00000614234 87 ntBASIC1.95□□□□□ -2.1
CD28P10747 SNHG22-203ENST00000617833 660 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC073308.1-201ENST00000623696 305 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC079228.1-201ENST00000624774 1049 ntBASIC1.95□□□□□ -2.1
CD28P10747 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CD28P10747 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
CD28P10747 CR848007.1-201ENST00000442354 1699 ntBASIC1.95□□□□□ -2.1
CD28P10747 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CD28P10747 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CD28P10747 AC026241.1-201ENST00000517873 2142 ntBASIC1.94□□□□□ -2.1
CD28P10747 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CD28P10747 RNU6-289P-201ENST00000364093 107 ntBASIC1.94□□□□□ -2.1
CD28P10747 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.94□□□□□ -2.1
CD28P10747 CCNG1P1-201ENST00000406783 885 ntBASIC1.94□□□□□ -2.1
CD28P10747 SNORA3.2-201ENST00000408221 125 ntBASIC1.94□□□□□ -2.1
CD28P10747 RNU4-53P-201ENST00000410828 140 ntBASIC1.94□□□□□ -2.1
CD28P10747 RN7SKP140-201ENST00000411196 284 ntBASIC1.94□□□□□ -2.1
CD28P10747 RNU6-516P-201ENST00000411381 104 ntBASIC1.94□□□□□ -2.1
CD28P10747 AL513331.1-201ENST00000411908 397 ntBASIC1.94□□□□□ -2.1
CD28P10747 HMGN2P35-201ENST00000412164 270 ntBASIC1.94□□□□□ -2.1
CD28P10747 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.94□□□□□ -2.1
CD28P10747 NANOGP5-201ENST00000424456 877 ntBASIC1.94□□□□□ -2.1
CD28P10747 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.94□□□□□ -2.1
CD28P10747 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.94□□□□□ -2.1
CD28P10747 AC092648.1-201ENST00000425870 423 ntBASIC1.94□□□□□ -2.1
CD28P10747 AC009414.1-201ENST00000427200 443 ntBASIC1.94□□□□□ -2.1
CD28P10747 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.94□□□□□ -2.1
CD28P10747 FCF1P1-201ENST00000432690 571 ntBASIC1.94□□□□□ -2.1
CD28P10747 USP9YP24-201ENST00000434374 697 ntBASIC1.94□□□□□ -2.1
CD28P10747 AC084290.1-201ENST00000434995 374 ntBASIC1.94□□□□□ -2.1
CD28P10747 ARPC3P1-201ENST00000437218 533 ntBASIC1.94□□□□□ -2.1
CD28P10747 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.94□□□□□ -2.1
CD28P10747 USP9YP17-201ENST00000444617 696 ntBASIC1.94□□□□□ -2.1
CD28P10747 AC104389.3-201ENST00000445629 235 ntBASIC1.94□□□□□ -2.1
CD28P10747 HIGD1AP2-201ENST00000446367 280 ntBASIC1.94□□□□□ -2.1
CD28P10747 ST13P20-201ENST00000447996 1065 ntBASIC1.94□□□□□ -2.1
CD28P10747 AP000542.1-201ENST00000448473 371 ntBASIC1.94□□□□□ -2.1
CD28P10747 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.94□□□□□ -2.1
CD28P10747 RN7SL636P-201ENST00000497504 294 ntBASIC1.94□□□□□ -2.1
CD28P10747 UBE2V1P12-201ENST00000503954 474 ntBASIC1.94□□□□□ -2.1
CD28P10747 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.94□□□□□ -2.1
CD28P10747 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.94□□□□□ -2.1
CD28P10747 AC113155.1-201ENST00000511141 769 ntBASIC1.94□□□□□ -2.1
CD28P10747 TBCAP3-201ENST00000512475 312 ntBASIC1.94□□□□□ -2.1
CD28P10747 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.94□□□□□ -2.1
CD28P10747 RNU1-41P-201ENST00000516161 162 ntBASIC1.94□□□□□ -2.1
CD28P10747 RNU1-48P-201ENST00000516400 162 ntBASIC1.94□□□□□ -2.1
CD28P10747 SUB1P1-201ENST00000524415 382 ntBASIC1.94□□□□□ -2.1
CD28P10747 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.94□□□□□ -2.1
CD28P10747 AL391261.3-201ENST00000557194 520 ntBASIC1.94□□□□□ -2.1
CD28P10747 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.94□□□□□ -2.1
CD28P10747 AC090888.1-201ENST00000561335 1141 ntBASIC1.94□□□□□ -2.1
CD28P10747 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.94□□□□□ -2.1
CD28P10747 AC010546.1-201ENST00000569391 485 ntBASIC1.94□□□□□ -2.1
CD28P10747 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.94□□□□□ -2.1
CD28P10747 AC007938.3-201ENST00000604965 623 ntBASIC1.94□□□□□ -2.1
CD28P10747 AL139344.1-201ENST00000605228 195 ntBASIC1.94□□□□□ -2.1
CD28P10747 AC080013.3-201ENST00000606839 578 ntBASIC1.94□□□□□ -2.1
CD28P10747 AL157392.4-201ENST00000609756 345 ntBASIC1.94□□□□□ -2.1
CD28P10747 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.94□□□□□ -2.1
CD28P10747 AL109620.1-201ENST00000618738 1197 ntBASIC1.94□□□□□ -2.1
CD28P10747 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CD28P10747 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CD28P10747 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.93□□□□□ -2.1
CD28P10747 ZNF658B-202ENST00000615961 3375 ntBASIC1.93□□□□□ -2.1
CD28P10747 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CD28P10747 RNU1-105P-201ENST00000363470 161 ntBASIC1.93□□□□□ -2.1
CD28P10747 RNU1-39P-201ENST00000383897 165 ntBASIC1.93□□□□□ -2.1
CD28P10747 RNU6-1242P-201ENST00000391052 103 ntBASIC1.93□□□□□ -2.1
CD28P10747 AC080125.1-201ENST00000414888 684 ntBASIC1.93□□□□□ -2.1
CD28P10747 Z98742.3-201ENST00000418637 326 ntBASIC1.93□□□□□ -2.1
CD28P10747 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.93□□□□□ -2.1
CD28P10747 AL354692.1-201ENST00000423044 315 ntBASIC1.93□□□□□ -2.1
CD28P10747 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CD28P10747 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.93□□□□□ -2.1
CD28P10747 UBE2V1P13-201ENST00000436983 439 ntBASIC1.93□□□□□ -2.1
CD28P10747 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.93□□□□□ -2.1
CD28P10747 MTND2P24-201ENST00000453434 806 ntBASIC1.93□□□□□ -2.1
CD28P10747 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CD28P10747 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.93□□□□□ -2.1
CD28P10747 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms