Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.32□□□□□ -1.72
SNRPA1P09661 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNRPA1P09661 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.32□□□□□ -1.72
SNRPA1P09661 AC023141.12-201ENST00000512399 199 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.32□□□□□ -1.72
SNRPA1P09661 GMPSP1-201ENST00000514075 579 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.32□□□□□ -1.72
SNRPA1P09661 OR5B19P-201ENST00000531766 928 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AC135001.1-201ENST00000544546 283 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AC005476.1-201ENST00000554427 397 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AL360157.1-201ENST00000565962 87 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AC105224.1-201ENST00000587055 421 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AL121757.2-201ENST00000611223 313 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AL158196.1-201ENST00000616786 434 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AC022149.2-201ENST00000621061 203 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.32□□□□□ -1.72
SNRPA1P09661 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.32□□□□□ -1.72
SNRPA1P09661 AC112487.2-201ENST00000637950 304 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SNRPA1P09661 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNRPA1P09661 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNRPA1P09661 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SNRPA1P09661 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.32□□□□□ -1.72
SNRPA1P09661 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNRPA1P09661 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNRPA1P09661 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNRPA1P09661 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
SNRPA1P09661 NACAP2-201ENST00000318548 624 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 RPL7P26-201ENST00000333817 754 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 Y_RNA.367-201ENST00000365544 101 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SNRPA1P09661 SNORA70E-201ENST00000384492 135 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 MT-TD-201ENST00000387419 68 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 Z99755.1-201ENST00000414048 380 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 AC016831.2-201ENST00000417179 352 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.31□□□□□ -1.72
SNRPA1P09661 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.31□□□□□ -1.72
SNRPA1P09661 OR4K11P-201ENST00000431829 904 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.31□□□□□ -1.72
SNRPA1P09661 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.31□□□□□ -1.72
SNRPA1P09661 AC108059.3-201ENST00000456388 214 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.31□□□□□ -1.72
SNRPA1P09661 AC078785.3-201ENST00000476607 425 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.31□□□□□ -1.72
SNRPA1P09661 AC010486.1-201ENST00000511793 424 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.31□□□□□ -1.72
SNRPA1P09661 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.31□□□□□ -1.72
SNRPA1P09661 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.31□□□□□ -1.72
SNRPA1P09661 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.31□□□□□ -1.72
SNRPA1P09661 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.31□□□□□ -1.72
SNRPA1P09661 RPL21P12-201ENST00000559810 515 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 OR4K8P-201ENST00000578842 1048 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 AC011712.1-201ENST00000588959 234 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 AL121992.2-201ENST00000606262 256 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 AC004825.2-201ENST00000616634 455 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 MIR4496-201ENST00000635896 61 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 AC100810.6-201ENST00000638068 285 ntBASIC4.31□□□□□ -1.72
SNRPA1P09661 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.31□□□□□ -1.72
SNRPA1P09661 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 AC006020.1-201ENST00000420179 1854 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.3□□□□□ -1.72
SNRPA1P09661 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.3□□□□□ -1.72
SNRPA1P09661 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.3□□□□□ -1.72
SNRPA1P09661 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
SNRPA1P09661 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 CEP170P1-201ENST00000502249 4587 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.3□□□□□ -1.72
SNRPA1P09661 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNRPA1P09661 Y_RNA.22-201ENST00000362492 102 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 Y_RNA.72-201ENST00000362894 103 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 RNA5SP374-201ENST00000362939 125 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 RNU6-356P-201ENST00000384140 107 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 Y_RNA.529-201ENST00000384586 119 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 LAP3P1-201ENST00000403648 294 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 RNU2-62P-201ENST00000410868 191 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.3□□□□□ -1.72
SNRPA1P09661 SDCBPP3-201ENST00000419629 891 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.3□□□□□ -1.72
SNRPA1P09661 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.3□□□□□ -1.72
SNRPA1P09661 RPS20P5-201ENST00000434808 360 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.3□□□□□ -1.72
SNRPA1P09661 APOOP4-201ENST00000513530 597 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 Vault.1-201ENST00000516474 102 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 SNORA70.19-201ENST00000516717 90 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.3□□□□□ -1.72
SNRPA1P09661 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.3□□□□□ -1.72
SNRPA1P09661 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.3□□□□□ -1.72
SNRPA1P09661 AC018638.8-201ENST00000588755 281 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 AC010525.2-201ENST00000590920 195 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 AC004908.2-201ENST00000609090 574 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 AL136313.1-201ENST00000624804 202 ntBASIC4.3□□□□□ -1.72
SNRPA1P09661 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms