Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC4P09017 AL512347.1-201ENST00000566420 503 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC4P09017 AC064872.1-201ENST00000604823 1072 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC4P09017 AC122108.2-201ENST00000611946 526 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 MIR6817-201ENST00000615588 66 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AL356585.4-201ENST00000623078 1229 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
HOXC4P09017 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HOXC4P09017 CDR1-202ENST00000625883 1485 ntBASIC2.58□□□□□ -2
HOXC4P09017 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXC4P09017 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.58□□□□□ -2
HOXC4P09017 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HOXC4P09017 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HOXC4P09017 MIR449A-201ENST00000362113 91 ntBASIC2.58□□□□□ -2
HOXC4P09017 RNU4-21P-201ENST00000362802 126 ntBASIC2.58□□□□□ -2
HOXC4P09017 RNU6-433P-201ENST00000363216 104 ntBASIC2.58□□□□□ -2
HOXC4P09017 U3.4-201ENST00000363352 213 ntBASIC2.58□□□□□ -2
HOXC4P09017 MIR493-201ENST00000385254 89 ntBASIC2.58□□□□□ -2
HOXC4P09017 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
HOXC4P09017 USP9YP33-201ENST00000412220 421 ntBASIC2.58□□□□□ -2
HOXC4P09017 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.58□□□□□ -2
HOXC4P09017 AC006366.1-201ENST00000422002 759 ntBASIC2.58□□□□□ -2
HOXC4P09017 RPL27AP8-201ENST00000424277 446 ntBASIC2.58□□□□□ -2
HOXC4P09017 EZH2P1-201ENST00000431167 291 ntBASIC2.58□□□□□ -2
HOXC4P09017 USP9YP35-201ENST00000435696 412 ntBASIC2.58□□□□□ -2
HOXC4P09017 MUPP-201ENST00000438111 566 ntBASIC2.58□□□□□ -2
HOXC4P09017 MTCO1P19-201ENST00000443487 500 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.58□□□□□ -2
HOXC4P09017 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.58□□□□□ -2
HOXC4P09017 Z82190.1-201ENST00000454534 490 ntBASIC2.58□□□□□ -2
HOXC4P09017 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 RPL30P9-201ENST00000465586 330 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC072039.1-201ENST00000477611 581 ntBASIC2.58□□□□□ -2
HOXC4P09017 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.58□□□□□ -2
HOXC4P09017 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AC010424.1-201ENST00000506336 297 ntBASIC2.58□□□□□ -2
HOXC4P09017 CBX3P3-201ENST00000508108 532 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC091965.2-201ENST00000512324 613 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC114781.4-201ENST00000513707 639 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC022447.1-201ENST00000515358 464 ntBASIC2.58□□□□□ -2
HOXC4P09017 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC106038.2-201ENST00000520706 568 ntBASIC2.58□□□□□ -2
HOXC4P09017 SLC2A13P1-201ENST00000531560 322 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.58□□□□□ -2
HOXC4P09017 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.58□□□□□ -2
HOXC4P09017 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.58□□□□□ -2
HOXC4P09017 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AC012213.3-201ENST00000577199 777 ntBASIC2.58□□□□□ -2
HOXC4P09017 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 AC073544.2-201ENST00000601155 540 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC068790.2-201ENST00000602601 557 ntBASIC2.58□□□□□ -2
HOXC4P09017 AC069304.2-201ENST00000605154 435 ntBASIC2.58□□□□□ -2
HOXC4P09017 AL031775.1-201ENST00000607014 887 ntBASIC2.58□□□□□ -2
HOXC4P09017 AP001521.1-201ENST00000609150 300 ntBASIC2.58□□□□□ -2
HOXC4P09017 AL356266.1-201ENST00000623311 483 ntBASIC2.58□□□□□ -2
HOXC4P09017 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
HOXC4P09017 MTND4P5-201ENST00000435821 1374 ntBASIC2.58□□□□□ -2
HOXC4P09017 AL359693.1-201ENST00000614959 2407 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC011460.1-201ENST00000636268 1834 ntBASIC2.57□□□□□ -2
HOXC4P09017 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
HOXC4P09017 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HOXC4P09017 SNRPEP3-201ENST00000338402 276 ntBASIC2.57□□□□□ -2
HOXC4P09017 Y_RNA.25-201ENST00000362528 102 ntBASIC2.57□□□□□ -2
HOXC4P09017 RNU6-216P-201ENST00000363282 104 ntBASIC2.57□□□□□ -2
HOXC4P09017 U3.12-201ENST00000364498 214 ntBASIC2.57□□□□□ -2
HOXC4P09017 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
HOXC4P09017 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HOXC4P09017 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
HOXC4P09017 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.57□□□□□ -2
HOXC4P09017 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.57□□□□□ -2
HOXC4P09017 MTCO3P5-201ENST00000433620 714 ntBASIC2.57□□□□□ -2
HOXC4P09017 MTCYBP39-201ENST00000437562 491 ntBASIC2.57□□□□□ -2
HOXC4P09017 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.57□□□□□ -2
HOXC4P09017 AL121871.1-201ENST00000443413 436 ntBASIC2.57□□□□□ -2
HOXC4P09017 EEF1E1P1-201ENST00000446998 430 ntBASIC2.57□□□□□ -2
HOXC4P09017 EPS15P1-201ENST00000448836 336 ntBASIC2.57□□□□□ -2
HOXC4P09017 RPL23AP35-201ENST00000451906 501 ntBASIC2.57□□□□□ -2
HOXC4P09017 TRGVB-201ENST00000453257 471 ntBASIC2.57□□□□□ -2
HOXC4P09017 RPL23AP11-201ENST00000475260 469 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC126389.1-201ENST00000477436 290 ntBASIC2.57□□□□□ -2
HOXC4P09017 KC877373.1-201ENST00000479066 408 ntBASIC2.57□□□□□ -2
HOXC4P09017 RPL9P33-201ENST00000484311 566 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC109486.1-201ENST00000486833 374 ntBASIC2.57□□□□□ -2
HOXC4P09017 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.57□□□□□ -2
HOXC4P09017 AIG1P1-201ENST00000503376 148 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.57□□□□□ -2
HOXC4P09017 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.57□□□□□ -2
HOXC4P09017 MTCYBP43-201ENST00000513621 740 ntBASIC2.57□□□□□ -2
HOXC4P09017 Y_RNA.695-201ENST00000516715 107 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.57□□□□□ -2
HOXC4P09017 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms