Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC012005.1-201ENST00000624575 75 ntBASIC2.57□□□□□ -2
TPM2P07951 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.57□□□□□ -2
TPM2P07951 MIR3199-2-201ENST00000636243 86 ntBASIC2.57□□□□□ -2
TPM2P07951 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.57□□□□□ -2
TPM2P07951 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TPM2P07951 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TPM2P07951 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
TPM2P07951 RNA5SP68-201ENST00000363885 119 ntBASIC2.56□□□□□ -2
TPM2P07951 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.56□□□□□ -2
TPM2P07951 RNU6-1122P-201ENST00000384449 107 ntBASIC2.56□□□□□ -2
TPM2P07951 MTCYBP38-201ENST00000417160 1123 ntBASIC2.56□□□□□ -2
TPM2P07951 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.56□□□□□ -2
TPM2P07951 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.56□□□□□ -2
TPM2P07951 UBE2FP3-201ENST00000436366 524 ntBASIC2.56□□□□□ -2
TPM2P07951 USP9YP22-201ENST00000438971 294 ntBASIC2.56□□□□□ -2
TPM2P07951 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.56□□□□□ -2
TPM2P07951 AC124916.1-201ENST00000444020 547 ntBASIC2.56□□□□□ -2
TPM2P07951 RPL23AP7-203ENST00000449021 469 ntBASIC2.56□□□□□ -2
TPM2P07951 MTND1P9-201ENST00000453775 944 ntBASIC2.56□□□□□ -2
TPM2P07951 RPL30P9-201ENST00000465586 330 ntBASIC2.56□□□□□ -2
TPM2P07951 AC004263.1-201ENST00000479327 332 ntBASIC2.56□□□□□ -2
TPM2P07951 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.56□□□□□ -2
TPM2P07951 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.56□□□□□ -2
TPM2P07951 HMGB1P28-201ENST00000507778 552 ntBASIC2.56□□□□□ -2
TPM2P07951 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.56□□□□□ -2
TPM2P07951 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.56□□□□□ -2
TPM2P07951 LTV1P1-201ENST00000510683 1237 ntBASIC2.56□□□□□ -2
TPM2P07951 MIR892C-201ENST00000516410 77 ntBASIC2.56□□□□□ -2
TPM2P07951 HMGN1P28-201ENST00000521340 364 ntBASIC2.56□□□□□ -2
TPM2P07951 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.56□□□□□ -2
TPM2P07951 UBTFL10-201ENST00000528532 562 ntBASIC2.56□□□□□ -2
TPM2P07951 LARP7P3-201ENST00000579888 337 ntBASIC2.56□□□□□ -2
TPM2P07951 AC006023.1-201ENST00000603944 259 ntBASIC2.56□□□□□ -2
TPM2P07951 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.56□□□□□ -2
TPM2P07951 AC069294.1-201ENST00000608397 350 ntBASIC2.56□□□□□ -2
TPM2P07951 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
TPM2P07951 AC009268.2-201ENST00000621925 457 ntBASIC2.56□□□□□ -2
TPM2P07951 AL160394.1-201ENST00000624765 724 ntBASIC2.56□□□□□ -2
TPM2P07951 AC091948.2-201ENST00000636510 279 ntBASIC2.56□□□□□ -2
TPM2P07951 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TPM2P07951 MTND5P30-201ENST00000452896 1731 ntBASIC2.56□□□□□ -2
TPM2P07951 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TPM2P07951 AC062016.1-201ENST00000355719 319 ntBASIC2.55□□□□□ -2
TPM2P07951 MIR518C-201ENST00000384822 101 ntBASIC2.55□□□□□ -2
TPM2P07951 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.55□□□□□ -2
TPM2P07951 TXNP7-201ENST00000406296 293 ntBASIC2.55□□□□□ -2
TPM2P07951 AL030996.1-201ENST00000411430 235 ntBASIC2.55□□□□□ -2
TPM2P07951 AC096664.2-201ENST00000411843 406 ntBASIC2.55□□□□□ -2
TPM2P07951 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.55□□□□□ -2
TPM2P07951 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.55□□□□□ -2
TPM2P07951 SNRPEP9-201ENST00000436794 238 ntBASIC2.55□□□□□ -2
TPM2P07951 BTBD7P2-201ENST00000441962 620 ntBASIC2.55□□□□□ -2
TPM2P07951 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.55□□□□□ -2
TPM2P07951 TRBV1-201ENST00000476502 284 ntBASIC2.55□□□□□ -2
TPM2P07951 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.55□□□□□ -2
TPM2P07951 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.55□□□□□ -2
TPM2P07951 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.55□□□□□ -2
TPM2P07951 RNU6-583P-201ENST00000516012 92 ntBASIC2.55□□□□□ -2
TPM2P07951 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.55□□□□□ -2
TPM2P07951 CYCSP26-201ENST00000534107 320 ntBASIC2.55□□□□□ -2
TPM2P07951 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.55□□□□□ -2
TPM2P07951 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.55□□□□□ -2
TPM2P07951 AC024619.4-201ENST00000580924 316 ntBASIC2.55□□□□□ -2
TPM2P07951 MIR3935-201ENST00000583472 104 ntBASIC2.55□□□□□ -2
TPM2P07951 AL139344.1-201ENST00000605228 195 ntBASIC2.55□□□□□ -2
TPM2P07951 AL445264.1-201ENST00000621719 171 ntBASIC2.55□□□□□ -2
TPM2P07951 AC019226.1-201ENST00000625666 515 ntBASIC2.55□□□□□ -2
TPM2P07951 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.54□□□□□ -2
TPM2P07951 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.54□□□□□ -2
TPM2P07951 RNU6-97P-201ENST00000363387 104 ntBASIC2.54□□□□□ -2
TPM2P07951 RNU6-525P-201ENST00000363685 104 ntBASIC2.54□□□□□ -2
TPM2P07951 SNORA16B-201ENST00000364674 135 ntBASIC2.54□□□□□ -2
TPM2P07951 Y_RNA.333-201ENST00000365274 102 ntBASIC2.54□□□□□ -2
TPM2P07951 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.54□□□□□ -2
TPM2P07951 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.54□□□□□ -2
TPM2P07951 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.54□□□□□ -2
TPM2P07951 AC003685.2-201ENST00000422795 395 ntBASIC2.54□□□□□ -2
TPM2P07951 BX119904.4-201ENST00000424402 301 ntBASIC2.54□□□□□ -2
TPM2P07951 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.54□□□□□ -2
TPM2P07951 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.54□□□□□ -2
TPM2P07951 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.54□□□□□ -2
TPM2P07951 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.54□□□□□ -2
TPM2P07951 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.54□□□□□ -2
TPM2P07951 PSPHP1-201ENST00000450062 261 ntBASIC2.54□□□□□ -2
TPM2P07951 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.54□□□□□ -2
TPM2P07951 AC068781.1-201ENST00000488231 618 ntBASIC2.54□□□□□ -2
TPM2P07951 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.54□□□□□ -2
TPM2P07951 AC234781.5-201ENST00000508429 271 ntBASIC2.54□□□□□ -2
TPM2P07951 AC008837.1-201ENST00000511513 412 ntBASIC2.54□□□□□ -2
TPM2P07951 RNU1-40P-201ENST00000516816 164 ntBASIC2.54□□□□□ -2
TPM2P07951 RNU1-97P-201ENST00000516872 164 ntBASIC2.54□□□□□ -2
TPM2P07951 RNA5SP290-201ENST00000517133 127 ntBASIC2.54□□□□□ -2
TPM2P07951 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.54□□□□□ -2
TPM2P07951 AL133241.1-201ENST00000556832 487 ntBASIC2.54□□□□□ -2
TPM2P07951 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.54□□□□□ -2
TPM2P07951 AC025165.5-201ENST00000602802 578 ntBASIC2.54□□□□□ -2
TPM2P07951 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
TPM2P07951 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.54□□□□□ -2
TPM2P07951 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
TPM2P07951 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms