Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 IPO7P1-201ENST00000442031 636 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC005297.2-201ENST00000450430 606 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC090453.1-201ENST00000495560 436 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC114786.4-201ENST00000508771 728 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC114797.1-201ENST00000514003 728 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 SCARNA17.1-201ENST00000516211 143 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 SCARNA17.2-201ENST00000516334 143 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AP003066.2-201ENST00000529375 555 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC006518.2-201ENST00000542513 940 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AL132857.1-201ENST00000555180 708 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC087465.1-201ENST00000560574 245 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AL731537.2-201ENST00000561565 951 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 LINC00557-201ENST00000563184 1279 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 APOOP1-201ENST00000604695 592 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC004853.1-201ENST00000604902 698 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC080013.4-201ENST00000607624 649 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC005332.10-201ENST00000612725 619 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 MIR8084-201ENST00000614105 89 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 SCARNA17.4-201ENST00000614296 143 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 MIR6130-201ENST00000619419 109 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC097460.3-201ENST00000623099 442 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AP006437.1-201ENST00000641440 3685 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 RNU6-1066P-201ENST00000363573 105 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 RNU6-217P-201ENST00000384164 104 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 HMGB1P17-201ENST00000403495 628 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 MIR1261-201ENST00000408659 82 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 RNU2-40P-201ENST00000410833 196 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 RNU6-1328P-201ENST00000410938 106 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 PPP1R11P2-201ENST00000423543 382 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 FAM204CP-201ENST00000424489 642 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 PIGFP3-201ENST00000441918 722 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 snoU13.15-201ENST00000459407 104 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 RPS27P21-201ENST00000486977 252 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC138853.1-201ENST00000503549 823 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC010460.2-201ENST00000509054 677 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 SCARNA11.3-201ENST00000517276 130 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 HMGN2P15-201ENST00000585707 270 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 NRBF2P1-201ENST00000587407 859 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AP000238.1-201ENST00000608759 426 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AL359851.1-201ENST00000569460 4997 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB2P05538 AC005832.2-201ENST00000538921 1430 ntBASIC1.81□□□□□ -2.12
HLA-DQB2P05538 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 MIR506-201ENST00000384998 124 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 MIR1289-2-201ENST00000408360 111 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 BX664727.1-201ENST00000416024 466 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 CCDC58P2-201ENST00000417131 366 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 SEPT2P1-201ENST00000419651 180 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 Z82210.1-201ENST00000440037 231 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AC097493.1-201ENST00000463958 372 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AC022493.1-201ENST00000492984 337 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 RPL23AP63-201ENST00000498752 471 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AC121161.1-201ENST00000510606 652 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AP000873.5-201ENST00000533906 236 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AC004067.1-201ENST00000608733 700 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AC003001.2-201ENST00000616294 831 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms