Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.85□□□□□ -1.63
PDGFAP04085 AC245028.1-201ENST00000423259 256 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 AC007560.1-201ENST00000426912 237 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.85□□□□□ -1.63
PDGFAP04085 MTND3P9-201ENST00000429526 346 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.85□□□□□ -1.63
PDGFAP04085 AC011753.3-201ENST00000443436 406 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 CEACAMP4-201ENST00000457676 421 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 RPL23AP24-201ENST00000458203 385 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.85□□□□□ -1.63
PDGFAP04085 AC097484.1-201ENST00000471148 389 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 AL590705.4-201ENST00000532209 134 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.85□□□□□ -1.63
PDGFAP04085 MIR4697-201ENST00000582977 78 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 SRGNP1-201ENST00000603392 451 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 AL591926.8-201ENST00000616876 211 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.85□□□□□ -1.63
PDGFAP04085 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.85□□□□□ -1.63
PDGFAP04085 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFAP04085 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PDGFAP04085 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFAP04085 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFAP04085 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFAP04085 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFAP04085 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFAP04085 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFAP04085 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFAP04085 OR4F13P-202ENST00000560066 2054 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFAP04085 AC139713.2-214ENST00000642059 1811 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 MTND5P6-201ENST00000422338 1798 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PDGFAP04085 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFAP04085 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFAP04085 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFAP04085 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFAP04085 RN7SKP95-201ENST00000362860 303 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 U3.3-201ENST00000362986 216 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 Y_RNA.183-201ENST00000363882 113 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 U3.15-201ENST00000365398 212 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 Y_RNA.478-201ENST00000384358 107 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 Y_RNA.518-201ENST00000384552 113 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 MIR192-201ENST00000384915 110 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 RNU2-64P-201ENST00000411315 191 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFAP04085 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFAP04085 AL358472.1-201ENST00000431295 329 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFAP04085 PIGFP3-201ENST00000441918 722 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AC013470.1-201ENST00000453438 462 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFAP04085 AL356981.1-201ENST00000454879 684 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 RN7SKP210-201ENST00000459176 261 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 TRBVB-201ENST00000477100 408 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AC098976.1-201ENST00000513014 541 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 RNU6-570P-201ENST00000517051 105 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AC122688.1-201ENST00000541494 223 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AC008033.2-201ENST00000542626 177 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.84□□□□□ -1.63
PDGFAP04085 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.84□□□□□ -1.63
PDGFAP04085 AC090132.2-201ENST00000615881 347 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 AP000346.3-201ENST00000622821 210 ntBASIC4.84□□□□□ -1.63
PDGFAP04085 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
PDGFAP04085 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PDGFAP04085 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFAP04085 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PDGFAP04085 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDGFAP04085 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
PDGFAP04085 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.84□□□□□ -1.64
PDGFAP04085 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.84□□□□□ -1.64
PDGFAP04085 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDGFAP04085 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
PDGFAP04085 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDGFAP04085 AC112198.2-201ENST00000426589 6996 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 AC000123.3-201ENST00000624029 4975 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFAP04085 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PDGFAP04085 SNORD50.1-201ENST00000362987 71 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 RNU6-1093P-201ENST00000391194 107 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 AL590139.1-201ENST00000416267 400 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFAP04085 TOMM22P1-201ENST00000418578 312 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFAP04085 AC091390.1-201ENST00000433904 331 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFAP04085 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFAP04085 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFAP04085 RPEP5-201ENST00000441137 268 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 AL078601.1-201ENST00000444542 271 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 ANP32BP2-201ENST00000454525 545 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 LINC01399-202ENST00000458450 244 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
PDGFAP04085 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms