Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 BDH2P1-201ENST00000602288 736 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 MIR15A-201ENST00000607334 83 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ALDH1A1P00352 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ALDH1A1P00352 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ALDH1A1P00352 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ALDH1A1P00352 RPL9P7-201ENST00000330965 580 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 RNU6-1298P-201ENST00000362456 101 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 SNORD63-201ENST00000384262 68 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 Y_RNA.488-201ENST00000384403 102 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 NDUFB4P8-201ENST00000435351 367 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 AL513043.1-201ENST00000439124 535 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 RPL9P9-202ENST00000466501 579 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 RPL30P11-201ENST00000495304 339 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 MIR2116-201ENST00000517221 80 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 AL590705.4-201ENST00000532209 134 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 AC133555.2-201ENST00000550213 292 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
ALDH1A1P00352 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ALDH1A1P00352 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ALDH1A1P00352 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.67□□□□□ -1.5
ALDH1A1P00352 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ALDH1A1P00352 SMG1P7-201ENST00000565246 2704 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 AC016745.2-201ENST00000608834 3443 ntBASIC5.67□□□□□ -1.5
ALDH1A1P00352 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.82-201ENST00000363000 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.92-201ENST00000363043 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.235-201ENST00000364412 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.272-201ENST00000364696 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.275-201ENST00000364726 110 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.306-201ENST00000365015 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.312-201ENST00000365089 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.322-201ENST00000365151 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.400-201ENST00000383963 111 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 SNORA37-201ENST00000384504 129 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 SNORA70.10-201ENST00000384515 134 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 AL031736.2-201ENST00000426573 787 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 AL359073.1-201ENST00000448036 403 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.650-201ENST00000459002 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 RNU6-1037P-201ENST00000459571 107 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 RN7SL814P-201ENST00000487715 300 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.679-201ENST00000516416 91 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 RNU2-31P-201ENST00000516954 155 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.777-201ENST00000516982 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 MIR2355-201ENST00000517199 87 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 H3F3AP1-201ENST00000559984 334 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.771-201ENST00000598668 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 AC108738.1-201ENST00000603703 237 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 AC123912.5-201ENST00000605470 343 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 AC009318.2-201ENST00000610917 651 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 Y_RNA.789-201ENST00000622480 102 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 MAPK10-338ENST00000641647 3362 ntBASIC5.66□□□□□ -1.5
ALDH1A1P00352 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ALDH1A1P00352 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ALDH1A1P00352 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ALDH1A1P00352 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ALDH1A1P00352 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ALDH1A1P00352 Y_RNA.43-201ENST00000362670 111 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 RNU6-288P-201ENST00000363690 104 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 Y_RNA.324-201ENST00000365165 102 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 SNORA70C-201ENST00000384538 135 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 MIR521-1-201ENST00000384902 87 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 MIR134-201ENST00000385258 73 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms