Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SDCBPP3-201ENST00000419629 891 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 AC007919.1-201ENST00000429380 217 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.25□□□□□ -1.89
GGPS1O95749 AC087499.2-201ENST00000432861 149 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.25□□□□□ -1.89
GGPS1O95749 AL512286.1-201ENST00000439244 400 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 PIGFP3-201ENST00000441918 722 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.25□□□□□ -1.89
GGPS1O95749 AL139824.2-201ENST00000458731 1095 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 RNU6-232P-201ENST00000517144 64 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.25□□□□□ -1.89
GGPS1O95749 ATP5F1P5-201ENST00000526403 760 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 AC093012.1-202ENST00000549403 582 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.25□□□□□ -1.89
GGPS1O95749 MIR4293-201ENST00000584305 78 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 NUTF2P8-201ENST00000604593 363 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 AL161729.4-201ENST00000604650 476 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 ATP1B3P1-201ENST00000605365 821 ntBASIC3.25□□□□□ -1.89
GGPS1O95749 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.25□□□□□ -1.89
GGPS1O95749 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.25□□□□□ -1.89
GGPS1O95749 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.25□□□□□ -1.89
GGPS1O95749 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GGPS1O95749 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.25□□□□□ -1.89
GGPS1O95749 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GGPS1O95749 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.24□□□□□ -1.89
GGPS1O95749 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GGPS1O95749 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GGPS1O95749 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GGPS1O95749 RNU5F-6P-201ENST00000362979 116 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 RNU6-217P-201ENST00000384164 104 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 RNU6-809P-201ENST00000384461 107 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AL031121.1-201ENST00000406553 254 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 NDUFB4P5-201ENST00000415445 361 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.24□□□□□ -1.89
GGPS1O95749 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.24□□□□□ -1.89
GGPS1O95749 AL353777.1-201ENST00000425552 326 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.24□□□□□ -1.89
GGPS1O95749 TIMM9P1-201ENST00000436122 256 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 GAPDHP27-201ENST00000447427 1020 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 NIPA2P5-201ENST00000452282 464 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 RNU7-125P-201ENST00000458760 62 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 snoU13.28-201ENST00000459235 104 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 KC877373.1-201ENST00000479066 408 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 RN7SL633P-201ENST00000488974 297 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.24□□□□□ -1.89
GGPS1O95749 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.24□□□□□ -1.89
GGPS1O95749 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
GGPS1O95749 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
GGPS1O95749 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.24□□□□□ -1.89
GGPS1O95749 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.24□□□□□ -1.89
GGPS1O95749 AC012435.1-202ENST00000568772 240 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 MIR4319-201ENST00000577285 85 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AC138761.3-201ENST00000579993 334 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.24□□□□□ -1.89
GGPS1O95749 AC245517.5-201ENST00000611529 162 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AC090970.3-201ENST00000612566 866 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AC009159.1-201ENST00000618386 642 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AC091304.6-201ENST00000619761 202 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AC073308.1-201ENST00000623696 305 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 AC093591.3-201ENST00000634516 308 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
GGPS1O95749 AL445523.1-201ENST00000451184 1362 ntBASIC3.24□□□□□ -1.89
GGPS1O95749 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.24□□□□□ -1.89
GGPS1O95749 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.24□□□□□ -1.89
GGPS1O95749 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.23□□□□□ -1.89
GGPS1O95749 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
GGPS1O95749 RNU6-278P-201ENST00000390945 109 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 RPL17P12-201ENST00000413391 526 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 AL592148.1-201ENST00000413568 445 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 AC107081.1-201ENST00000414975 361 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.23□□□□□ -1.89
GGPS1O95749 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.23□□□□□ -1.89
GGPS1O95749 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.23□□□□□ -1.89
GGPS1O95749 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.23□□□□□ -1.89
GGPS1O95749 AC118469.1-201ENST00000442943 488 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 ZNF114P1-201ENST00000453500 292 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 RPL7P5-201ENST00000471472 736 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 BZW1P2-201ENST00000473537 826 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.23□□□□□ -1.89
GGPS1O95749 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.23□□□□□ -1.89
GGPS1O95749 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
GGPS1O95749 MTND5P13-201ENST00000513046 1079 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.23□□□□□ -1.89
GGPS1O95749 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.23□□□□□ -1.89
GGPS1O95749 RNU6-927P-201ENST00000516199 100 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.23□□□□□ -1.89
GGPS1O95749 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.23□□□□□ -1.89
GGPS1O95749 MTND4LP18-201ENST00000526864 291 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.23□□□□□ -1.89
GGPS1O95749 AC079600.2-201ENST00000550076 130 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.23□□□□□ -1.89
GGPS1O95749 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GGPS1O95749 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.23□□□□□ -1.89
GGPS1O95749 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.23□□□□□ -1.89
GGPS1O95749 AP003485.2-201ENST00000623636 610 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 AL136313.1-201ENST00000624804 202 ntBASIC3.23□□□□□ -1.89
GGPS1O95749 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
GGPS1O95749 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
GGPS1O95749 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms