Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AL356118.1-201ENST00000635272 1078 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ABCA1O95477 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCA1O95477 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ABCA1O95477 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
ABCA1O95477 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCA1O95477 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCA1O95477 PGBD4P3-201ENST00000440731 581 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 DPPA3P1-201ENST00000448050 469 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA1O95477 AC096751.1-202ENST00000502691 1067 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA1O95477 AC096571.1-202ENST00000506634 735 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCA1O95477 AC013553.2-201ENST00000604244 589 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AC005332.10-201ENST00000612725 619 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 STMN1P1-201ENST00000617809 440 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AL391597.1-201ENST00000618707 694 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AL133216.2-202ENST00000634512 349 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 OR5H6-203ENST00000642105 978 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCA1O95477 AC123912.3-201ENST00000600907 1367 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 OR4G11P-202ENST00000642116 1414 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 RNA5SP258-201ENST00000362750 119 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 RNU6-452P-201ENST00000384406 107 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 U3.40-201ENST00000408706 208 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AL133384.1-201ENST00000412744 351 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.17□□□□□ -2.22
ABCA1O95477 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA1O95477 OSTCP8-201ENST00000445117 448 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 BX248409.1-201ENST00000455497 255 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCA1O95477 MTCO3P44-201ENST00000510977 541 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA1O95477 AP005902.1-201ENST00000521358 186 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA1O95477 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCA1O95477 MIR4658-201ENST00000584344 65 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AC010928.2-201ENST00000588017 287 ntBASIC1.17□□□□□ -2.22
ABCA1O95477 AC009812.4-201ENST00000569134 1805 ntBASIC1.16□□□□□ -2.22
ABCA1O95477 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
ABCA1O95477 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.16□□□□□ -2.22
ABCA1O95477 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.16□□□□□ -2.22
ABCA1O95477 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
ABCA1O95477 FABP5P3-201ENST00000437960 408 ntBASIC1.16□□□□□ -2.22
ABCA1O95477 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.16□□□□□ -2.22
ABCA1O95477 RPS29P1-201ENST00000465274 159 ntBASIC1.16□□□□□ -2.22
ABCA1O95477 RNU6-1223P-201ENST00000517124 104 ntBASIC1.16□□□□□ -2.22
ABCA1O95477 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.16□□□□□ -2.22
ABCA1O95477 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.16□□□□□ -2.22
ABCA1O95477 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.16□□□□□ -2.22
ABCA1O95477 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.16□□□□□ -2.22
ABCA1O95477 PVT1_3.1-201ENST00000620853 95 ntBASIC1.16□□□□□ -2.22
ABCA1O95477 AP006248.3-201ENST00000623580 594 ntBASIC1.16□□□□□ -2.22
ABCA1O95477 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.16□□□□□ -2.22
ABCA1O95477 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.16□□□□□ -2.22
ABCA1O95477 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
ABCA1O95477 RNU1-22P-201ENST00000363334 158 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 RNA5SP363-201ENST00000365072 115 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
ABCA1O95477 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.15□□□□□ -2.22
ABCA1O95477 RPL27AP8-201ENST00000424277 446 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 FO393419.3-201ENST00000428741 282 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 AL353689.1-201ENST00000438895 199 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 AC114322.1-201ENST00000506771 926 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 AC021146.8-201ENST00000507455 733 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 AC114786.4-201ENST00000508771 728 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
ABCA1O95477 AC114797.1-201ENST00000514003 728 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 IGKV2D-36-201ENST00000518643 226 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.15□□□□□ -2.22
ABCA1O95477 XIAPP1-201ENST00000603162 600 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 AC079610.2-201ENST00000604818 690 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 AC242628.1-201ENST00000606810 391 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.15□□□□□ -2.22
ABCA1O95477 AP000254.1-201ENST00000609934 520 ntBASIC1.15□□□□□ -2.22
ABCA1O95477 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.15□□□□□ -2.22
ABCA1O95477 RNU6-1074P-201ENST00000383995 104 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ABCA1O95477 RNU2-32P-201ENST00000411193 191 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 RPP40P1-201ENST00000426762 456 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 AC007560.1-201ENST00000426912 237 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 EZH2P1-201ENST00000431167 291 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.15□□□□□ -2.23
ABCA1O95477 KATNBL1P3-201ENST00000443475 909 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 RPS15AP27-201ENST00000449183 343 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ABCA1O95477 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.15□□□□□ -2.23
ABCA1O95477 RNU6-27P-201ENST00000516146 107 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 OR5AK1P-201ENST00000524837 922 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 AP003033.1-201ENST00000527244 415 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 AP005435.4-201ENST00000529514 284 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.15□□□□□ -2.23
ABCA1O95477 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.15□□□□□ -2.23
ABCA1O95477 AC009127.3-201ENST00000570531 403 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 MIR3609-201ENST00000582661 80 ntBASIC1.15□□□□□ -2.23
ABCA1O95477 AC002487.1-201ENST00000604565 994 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms