Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC002486.1-201ENST00000435098 391 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 HMGN2P20-201ENST00000437531 273 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-2O95096 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-2O95096 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-2O95096 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-2O95096 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-2O95096 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 RPS4XP2-201ENST00000458402 793 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-2O95096 AC006445.2-201ENST00000510061 472 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 SAP18P1-201ENST00000512058 390 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.21□□□□□ -1.9
NKX2-2O95096 AC026403.1-201ENST00000518938 295 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 AL359212.1-201ENST00000556608 614 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 HMGB1P6-201ENST00000569046 646 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 MIR4425-201ENST00000580572 84 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 MIR3609-201ENST00000582661 80 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-2O95096 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-2O95096 AL020997.2-201ENST00000602607 184 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 AC136601.2-201ENST00000604356 474 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-2O95096 AC093648.1-201ENST00000623546 606 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-2O95096 MTND5P17-201ENST00000418405 1603 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-2O95096 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-2O95096 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NKX2-2O95096 UBE2L2-201ENST00000254302 429 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-2O95096 Y_RNA.1-201ENST00000352915 104 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 SNORA73.2-201ENST00000364946 201 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 RNU6-190P-201ENST00000384154 102 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 RNU6-217P-201ENST00000384164 104 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 SNORA24.1-201ENST00000384401 135 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 MIR1-2-201ENST00000384961 85 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 MIR134-201ENST00000385258 73 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 MIR454-201ENST00000390180 115 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 RNA5SP38-201ENST00000410750 119 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC114491.1-201ENST00000416095 246 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 RPL17P36-201ENST00000420302 549 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AL109913.1-201ENST00000421173 514 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-2O95096 ISCA1P1-201ENST00000426679 387 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 ELOCP14-201ENST00000428070 331 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 MTND3P21-201ENST00000433774 331 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 HSPD1P21-201ENST00000436541 245 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 RPS15AP9-201ENST00000439856 381 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 ELOCP7-201ENST00000439968 331 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-2O95096 RPS24P13-201ENST00000442520 397 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 RPL21P23-201ENST00000446654 460 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 RPL39P36-201ENST00000490784 156 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC079382.1-201ENST00000493346 557 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-2O95096 AC002456.2-201ENST00000509356 380 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC108078.2-201ENST00000510750 236 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-2O95096 AC023632.4-201ENST00000517783 191 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.2□□□□□ -1.9
NKX2-2O95096 HIGD1AP1-201ENST00000550979 275 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-2O95096 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-2O95096 AC006504.3-201ENST00000586818 523 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX2-2O95096 Z84480.1-201ENST00000605131 311 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AL109618.2-201ENST00000605527 211 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC007684.1-201ENST00000609671 477 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AP001486.3-201ENST00000615334 372 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC124864.2-201ENST00000624736 186 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC005609.4-201ENST00000625071 447 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-2O95096 AL513302.2-201ENST00000562313 1842 ntBASIC3.2□□□□□ -1.9
NKX2-2O95096 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-2O95096 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-2O95096 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-2O95096 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-2O95096 GABRG2-229ENST00000641017 3628 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-2O95096 AL359693.1-201ENST00000614959 2407 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-2O95096 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-2O95096 RNU6-1120P-201ENST00000362988 108 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 RNU6-179P-201ENST00000363350 107 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 Y_RNA.245-201ENST00000364493 95 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 RNU6-61P-201ENST00000365528 109 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-2O95096 RNU6-1035P-201ENST00000384477 107 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NKX2-2O95096 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-2O95096 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-2O95096 RPS12P24-201ENST00000412619 387 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-2O95096 AC007390.1-201ENST00000415722 356 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-2O95096 BTF3L4P3-201ENST00000418879 476 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms