Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS4BO75351 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS4BO75351 AL645937.1-202ENST00000421799 937 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AC093106.2-201ENST00000428212 385 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AL358472.1-201ENST00000431295 329 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS4BO75351 RPL26P6-201ENST00000440913 438 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 RPS3AP12-201ENST00000443616 753 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS4BO75351 HMGN2P21-201ENST00000447764 270 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AL500522.2-201ENST00000448562 343 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS4BO75351 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS4BO75351 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS4BO75351 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS4BO75351 AC117522.3-201ENST00000507974 584 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 SNORA31.3-201ENST00000516029 96 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS4BO75351 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS4BO75351 AP004371.1-201ENST00000525240 214 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS4BO75351 AL121576.1-201ENST00000556055 276 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 HSPE1P5-201ENST00000561489 272 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AC025627.2-201ENST00000576220 160 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 MIR5684-201ENST00000585074 65 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS4BO75351 AC013553.2-201ENST00000604244 589 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AC087045.1-201ENST00000605856 382 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AC091953.5-201ENST00000622919 233 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 AC100810.6-201ENST00000638068 285 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS4BO75351 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS4BO75351 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS4BO75351 API5P2-201ENST00000397055 1498 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
VPS4BO75351 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS4BO75351 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
VPS4BO75351 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VPS4BO75351 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VPS4BO75351 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS4BO75351 Y_RNA.813-201ENST00000364639 102 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 SNORD81.2-201ENST00000365153 76 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 SNORA36C-201ENST00000384289 132 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 RN7SKP32-201ENST00000410167 303 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS4BO75351 DUTP6-201ENST00000425573 462 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS4BO75351 RPL7P28-201ENST00000437739 740 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AC093019.1-201ENST00000443135 252 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AC020550.1-201ENST00000447385 163 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 RPS24P6-201ENST00000452670 400 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AC108078.2-201ENST00000510750 236 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 NARSP2-201ENST00000518524 679 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS4BO75351 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4BO75351 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS4BO75351 OR5B10P-201ENST00000532869 642 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS4BO75351 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS4BO75351 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4BO75351 PSMA3P-201ENST00000555485 635 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4BO75351 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4BO75351 RN7SL703P-201ENST00000578485 302 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AC008521.1-201ENST00000587471 187 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AC067852.3-201ENST00000589177 561 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 VN1R80P-201ENST00000597126 338 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS4BO75351 AL161729.3-201ENST00000603533 673 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 AC007998.5-201ENST00000622938 237 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 U6.114-201ENST00000636407 96 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 NCAPGP1-201ENST00000505112 1814 ntBASIC3.9□□□□□ -1.79
VPS4BO75351 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS4BO75351 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
VPS4BO75351 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
VPS4BO75351 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS4BO75351 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4BO75351 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4BO75351 AC093908.1-201ENST00000623125 8092 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4BO75351 RNU4-76P-201ENST00000364509 141 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 RNU6-14P-201ENST00000384630 106 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 NDUFS5P1-201ENST00000405668 289 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 OR6C66P-201ENST00000414917 930 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4BO75351 RPL7P46-201ENST00000425129 740 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 RPL21P112-201ENST00000434403 463 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4BO75351 USP9YP7-201ENST00000436723 430 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4BO75351 HMGB1P37-201ENST00000439613 609 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4BO75351 USP9YP32-201ENST00000452432 430 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 BTF3L4P4-201ENST00000506381 449 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 AC112206.3-201ENST00000514578 389 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 SNORA31.20-201ENST00000517111 133 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 RNU6-1314P-201ENST00000517139 104 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 RN7SKP258-201ENST00000517151 304 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 AC008489.1-201ENST00000524271 483 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms