Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP4O75161 AC107308.1-201ENST00000615897 301 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 AP003122.6-201ENST00000623831 495 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 AL512506.2-201ENST00000624472 458 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.42□□□□□ -2.02
NPHP4O75161 ZNF663P-202ENST00000641770 1131 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.42□□□□□ -2.02
NPHP4O75161 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NPHP4O75161 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPHP4O75161 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPHP4O75161 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPHP4O75161 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPHP4O75161 RNU6-609P-201ENST00000365459 107 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 RNU6-207P-201ENST00000384137 107 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 RNU6-549P-201ENST00000384433 107 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 RPS15AP38-201ENST00000413110 372 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 AC027644.1-201ENST00000419595 298 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 PSMA6P3-201ENST00000428242 164 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 MTCYBP15-201ENST00000433123 1127 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 AC241584.1-201ENST00000438469 1241 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 OR6K5P-201ENST00000447050 945 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 AL359385.1-201ENST00000456509 365 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP4O75161 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP4O75161 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.42□□□□□ -2.02
NPHP4O75161 AP002748.2-201ENST00000528671 348 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 AP003049.1-201ENST00000529418 457 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 CYB5AP5-201ENST00000549779 389 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP4O75161 ACTR3BP3-201ENST00000565577 979 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 AC002984.1-201ENST00000591692 448 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.42□□□□□ -2.02
NPHP4O75161 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.41□□□□□ -2.02
NPHP4O75161 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPHP4O75161 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.41□□□□□ -2.02
NPHP4O75161 RNU6-492P-201ENST00000363035 104 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.41□□□□□ -2.02
NPHP4O75161 RPL21P32-201ENST00000419877 477 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 RPL7P30-201ENST00000420888 709 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.41□□□□□ -2.02
NPHP4O75161 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.41□□□□□ -2.02
NPHP4O75161 ARPC3P1-201ENST00000437218 533 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 RPS15AP7-201ENST00000439294 405 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 RAC1P7-201ENST00000445367 377 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.41□□□□□ -2.02
NPHP4O75161 snoU109.4-201ENST00000458953 143 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.41□□□□□ -2.02
NPHP4O75161 AC023632.1-201ENST00000518463 375 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 OR5AK1P-201ENST00000524837 922 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.41□□□□□ -2.02
NPHP4O75161 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NPHP4O75161 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.41□□□□□ -2.02
NPHP4O75161 AC013444.2-201ENST00000603317 787 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 AC010738.1-201ENST00000604970 987 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 MTND4P23-201ENST00000447723 1363 ntBASIC2.41□□□□□ -2.02
NPHP4O75161 GDI2P1-201ENST00000429312 1336 ntBASIC2.4□□□□□ -2.02
NPHP4O75161 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.4□□□□□ -2.03
NPHP4O75161 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NPHP4O75161 RNA5SP37-201ENST00000365420 130 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-1-201ENST00000383898 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-42P-201ENST00000384165 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-36P-201ENST00000384172 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-4P-201ENST00000384205 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-5P-201ENST00000384238 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-3P-201ENST00000384314 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 SNORD51-201ENST00000384320 80 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-2-201ENST00000384627 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-9-201ENST00000384776 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-33P-201ENST00000384793 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NPHP4O75161 VN1R10P-201ENST00000447106 875 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 SEPT14P24-201ENST00000447236 180 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 AC092757.1-201ENST00000467293 467 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.4□□□□□ -2.03
NPHP4O75161 ATP5EP1-201ENST00000510257 156 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.4□□□□□ -2.03
NPHP4O75161 SNORA70.16-201ENST00000516390 95 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.4□□□□□ -2.03
NPHP4O75161 AC007115.1-201ENST00000546853 234 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 AC007375.1-201ENST00000554513 578 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.4□□□□□ -2.03
NPHP4O75161 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.4□□□□□ -2.03
NPHP4O75161 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.4□□□□□ -2.03
NPHP4O75161 HSPE1P7-201ENST00000604681 321 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 RNU6-6P-201ENST00000606623 107 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.4□□□□□ -2.03
NPHP4O75161 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.4□□□□□ -2.03
NPHP4O75161 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NPHP4O75161 AP000676.4-201ENST00000624659 623 ntBASIC2.4□□□□□ -2.03
NPHP4O75161 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.4□□□□□ -2.03
NPHP4O75161 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NPHP4O75161 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.4□□□□□ -2.03
NPHP4O75161 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NPHP4O75161 RNU6-1066P-201ENST00000363573 105 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 RNY1-201ENST00000364228 113 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.39□□□□□ -2.03
NPHP4O75161 RNU6-1027P-201ENST00000383998 107 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 RPS4XP3-201ENST00000398541 413 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 TMSB4XP8-201ENST00000402089 135 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 TMSB4XP6-201ENST00000415187 135 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms