Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RPL21P8-201ENST00000465083 535 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC026979.1-201ENST00000492525 396 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 HMGB1P21-201ENST00000502313 581 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 AC093852.1-201ENST00000503587 266 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 TBCAP3-201ENST00000512475 312 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RNA5SP154-201ENST00000516193 111 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RNU6-255P-201ENST00000516957 105 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC084783.1-201ENST00000565846 910 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM13O60858 MIR4310-201ENST00000582950 57 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 MIR5188-201ENST00000583467 113 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RAC1P9-201ENST00000604990 392 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM13O60858 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM13O60858 C4BPAP1-201ENST00000415474 1893 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
TRIM13O60858 A2MP1-204ENST00000566278 4130 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM13O60858 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM13O60858 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM13O60858 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM13O60858 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM13O60858 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM13O60858 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM13O60858 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM13O60858 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM13O60858 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM13O60858 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM13O60858 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM13O60858 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM13O60858 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM13O60858 RNA5SP507-201ENST00000363603 121 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 RNU6-280P-201ENST00000364145 104 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 SNORA51.8-201ENST00000384234 132 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 LAP3P1-201ENST00000403648 294 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 MIR1911-201ENST00000410783 80 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 RNU6-387P-201ENST00000411331 105 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 RNU2-71P-201ENST00000411395 189 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AC096664.2-201ENST00000411843 406 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AC008065.1-201ENST00000428525 348 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM13O60858 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM13O60858 MRPS18BP2-201ENST00000434310 759 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 RPS20P1-201ENST00000434853 354 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM13O60858 AC016696.1-201ENST00000446949 318 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 CHEK2P4-201ENST00000450340 246 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 ABCF2P2-201ENST00000450549 296 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 BX276092.4-201ENST00000452056 248 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM13O60858 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM13O60858 AC108860.1-201ENST00000484521 383 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AC026801.1-201ENST00000497178 464 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM13O60858 PARP4P3-201ENST00000510265 317 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM13O60858 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM13O60858 SNORA14.1-201ENST00000516113 141 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 RNU5B-3P-201ENST00000516601 115 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 RNU6-1332P-201ENST00000516666 104 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 RNU6-1212P-201ENST00000517023 104 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM13O60858 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM13O60858 HMGN2P6-201ENST00000551091 273 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM13O60858 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM13O60858 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM13O60858 AC087385.3-201ENST00000620477 187 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AC127459.3-201ENST00000624328 466 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 AC091925.2-201ENST00000625059 256 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TRIM13O60858 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM13O60858 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM13O60858 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.35□□□□□ -1.71
TRIM13O60858 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM13O60858 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
TRIM13O60858 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM13O60858 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
TRIM13O60858 AL590240.1-201ENST00000334118 313 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM13O60858 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 Y_RNA.274-201ENST00000364714 101 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 Y_RNA.314-201ENST00000365114 102 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 RNU5E-6P-201ENST00000365574 115 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 RNU6-338P-201ENST00000383888 105 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 Y_RNA.539-201ENST00000384635 107 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 Y_RNA.551-201ENST00000384661 102 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 MIR93-201ENST00000385024 80 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 MIR513A2-201ENST00000385249 127 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM13O60858 RNU6-278P-201ENST00000390945 109 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 SAR1AP2-201ENST00000392696 594 ntBASIC4.34□□□□□ -1.71
TRIM13O60858 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms