Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.24□□□□□ -1.89
ZIC3O60481 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.24□□□□□ -1.89
ZIC3O60481 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.24□□□□□ -1.89
ZIC3O60481 MIR3921-201ENST00000577308 85 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
ZIC3O60481 AC067852.3-201ENST00000589177 561 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.24□□□□□ -1.89
ZIC3O60481 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZIC3O60481 AP001486.3-201ENST00000615334 372 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.24□□□□□ -1.89
ZIC3O60481 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ZIC3O60481 MIR6075-201ENST00000620782 95 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AL589994.2-201ENST00000621124 579 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.24□□□□□ -1.89
ZIC3O60481 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZIC3O60481 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZIC3O60481 PRO1804-201ENST00000623780 2050 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ZIC3O60481 AC006020.1-201ENST00000420179 1854 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZIC3O60481 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZIC3O60481 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZIC3O60481 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ZIC3O60481 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ZIC3O60481 SNORA62.1-201ENST00000364287 154 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 RNU6-61P-201ENST00000365528 109 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 RNU6-946P-201ENST00000383878 107 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 RNU6-14P-201ENST00000384630 106 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 MIR514A1-201ENST00000385133 98 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 AL451054.2-201ENST00000420896 202 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.23□□□□□ -1.89
ZIC3O60481 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.23□□□□□ -1.89
ZIC3O60481 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.23□□□□□ -1.89
ZIC3O60481 GTF2IP20-201ENST00000431663 360 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 HMGN2P31-201ENST00000432430 273 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.23□□□□□ -1.89
ZIC3O60481 RPL21P23-201ENST00000446654 460 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 ANP32BP2-201ENST00000454525 545 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 HMGN2P7-201ENST00000456186 273 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 RPS20P20-201ENST00000460498 340 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 GMFBP1-201ENST00000467831 427 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.23□□□□□ -1.89
ZIC3O60481 AL163973.1-201ENST00000484753 577 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 AC110768.1-201ENST00000509222 400 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 RNU2-58P-201ENST00000516403 183 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.23□□□□□ -1.89
ZIC3O60481 IGKV2D-19-201ENST00000523346 262 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.23□□□□□ -1.89
ZIC3O60481 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.23□□□□□ -1.89
ZIC3O60481 CKAP2P1-201ENST00000555477 2049 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 AL355836.1-201ENST00000555951 870 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 AC055876.1-202ENST00000567053 138 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZIC3O60481 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 AC007619.2-201ENST00000605743 379 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZIC3O60481 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ZIC3O60481 AL354950.2-201ENST00000617939 290 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 AC007998.5-201ENST00000622938 237 ntBASIC3.23□□□□□ -1.89
ZIC3O60481 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.23□□□□□ -1.89
ZIC3O60481 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZIC3O60481 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZIC3O60481 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.22□□□□□ -1.89
ZIC3O60481 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZIC3O60481 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.22□□□□□ -1.89
ZIC3O60481 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZIC3O60481 RNU1-18P-201ENST00000363062 164 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 RNU6-179P-201ENST00000363350 107 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 RNY3P3-201ENST00000363816 102 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 Y_RNA.255-201ENST00000364581 97 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 MIR218-2-201ENST00000385006 110 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 RPS29P4-201ENST00000414733 161 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.22□□□□□ -1.89
ZIC3O60481 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.22□□□□□ -1.89
ZIC3O60481 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.22□□□□□ -1.89
ZIC3O60481 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.22□□□□□ -1.89
ZIC3O60481 AC073063.1-201ENST00000434352 607 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 RPL7P28-201ENST00000437739 740 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 MTATP6P23-201ENST00000440153 476 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.22□□□□□ -1.89
ZIC3O60481 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.22□□□□□ -1.89
ZIC3O60481 WASF1P1-201ENST00000447560 1131 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 AC073415.1-201ENST00000449240 153 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 RBMY2UP-201ENST00000453474 324 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 RPS29P15-201ENST00000458329 171 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 RNU7-182P-201ENST00000459009 62 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 RPL7L1P8-201ENST00000469911 741 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 VN1R17P-201ENST00000472048 1090 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 AC078785.3-201ENST00000476607 425 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 AL049874.1-201ENST00000489560 388 ntBASIC3.22□□□□□ -1.89
ZIC3O60481 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms