Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.12□□□□□ -1.75
PRPF3O43395 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PRPF3O43395 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF3O43395 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF3O43395 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF3O43395 OR4G2P-201ENST00000328113 903 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF3O43395 SNORA73.2-201ENST00000364946 201 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 Y_RNA.367-201ENST00000365544 101 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 SMIM11P1-201ENST00000369586 178 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF3O43395 U3.42-201ENST00000408746 214 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AC080125.1-201ENST00000414888 684 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 Z85995.1-201ENST00000415547 335 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 DBIP2-201ENST00000419076 262 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AL109913.1-201ENST00000421173 514 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 CYCSP4-201ENST00000429682 331 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.12□□□□□ -1.75
PRPF3O43395 Z82210.1-201ENST00000440037 231 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 PRDX3P3-201ENST00000447765 522 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AC027673.1-201ENST00000456245 405 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 RNU6-420P-201ENST00000458780 107 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AC034236.1-201ENST00000469891 373 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 RPL32P34-201ENST00000486380 400 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AC026427.2-201ENST00000506228 536 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AC104619.4-201ENST00000510773 249 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF3O43395 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF3O43395 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.12□□□□□ -1.75
PRPF3O43395 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.12□□□□□ -1.75
PRPF3O43395 MIR4738-201ENST00000579134 87 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 MTATP6P3-201ENST00000581686 676 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AL391646.1-201ENST00000603860 190 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 Z84480.1-201ENST00000605131 311 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF3O43395 AC002076.2-201ENST00000617362 122 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 MIR6076-201ENST00000617521 113 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AL157786.1-207ENST00000627771 695 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF3O43395 U6.114-201ENST00000636407 96 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 MTND1P37-201ENST00000636562 264 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 MTND5P42-201ENST00000637720 498 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 AC009093.8-201ENST00000641769 292 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF3O43395 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PRPF3O43395 AP001148.1-201ENST00000624124 2359 ntBASIC4.12□□□□□ -1.75
PRPF3O43395 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
PRPF3O43395 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF3O43395 Y_RNA.159-201ENST00000363674 87 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 RNU6-190P-201ENST00000384154 102 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 CIR1P3-201ENST00000405137 479 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 RPL30P2-201ENST00000414021 291 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 AC017079.2-201ENST00000416102 485 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF3O43395 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.11□□□□□ -1.75
PRPF3O43395 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.11□□□□□ -1.75
PRPF3O43395 MTATP6P13-201ENST00000438531 667 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF3O43395 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF3O43395 RPL39P36-201ENST00000490784 156 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.11□□□□□ -1.75
PRPF3O43395 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF3O43395 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF3O43395 MTND4LP26-201ENST00000518144 282 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF3O43395 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF3O43395 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF3O43395 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF3O43395 AL157687.1-201ENST00000554853 619 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF3O43395 HMGB1P33-201ENST00000563485 527 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.11□□□□□ -1.75
PRPF3O43395 AP001094.1-201ENST00000579805 193 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 MIR4429-201ENST00000580105 73 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF3O43395 AC013553.2-201ENST00000604244 589 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 AC008536.2-201ENST00000607284 349 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 AP003355.3-201ENST00000623465 114 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 AL160394.1-201ENST00000624765 724 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF3O43395 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF3O43395 AL049641.1-201ENST00000441055 1948 ntBASIC4.11□□□□□ -1.75
PRPF3O43395 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF3O43395 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF3O43395 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
PRPF3O43395 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF3O43395 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PRPF3O43395 AC068647.1-201ENST00000489539 2265 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.1□□□□□ -1.75
PRPF3O43395 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF3O43395 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF3O43395 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF3O43395 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF3O43395 SNORA62.3-201ENST00000365110 153 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 MIR548F1-201ENST00000408667 84 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF3O43395 AC069157.1-201ENST00000421749 137 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 USP9YP18-201ENST00000425912 695 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF3O43395 RPL23AP30-201ENST00000432419 501 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms