Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC018634.1-201ENST00000437554 401 ntBASIC2.64□□□□□ -1.99
MSH4O15457 RPL32P28-201ENST00000443577 397 ntBASIC2.64□□□□□ -1.99
MSH4O15457 HIGD1AP2-201ENST00000446367 280 ntBASIC2.64□□□□□ -1.99
MSH4O15457 RPL23AP35-201ENST00000451906 501 ntBASIC2.64□□□□□ -1.99
MSH4O15457 AL109741.2-201ENST00000455561 343 ntBASIC2.64□□□□□ -1.99
MSH4O15457 ATG12P2-201ENST00000456830 416 ntBASIC2.64□□□□□ -1.99
MSH4O15457 snoU13.28-201ENST00000459235 104 ntBASIC2.64□□□□□ -1.99
MSH4O15457 RPS29P12-201ENST00000460178 152 ntBASIC2.64□□□□□ -1.99
MSH4O15457 AC034222.1-201ENST00000494052 532 ntBASIC2.64□□□□□ -1.99
MSH4O15457 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.64□□□□□ -1.99
MSH4O15457 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.64□□□□□ -1.99
MSH4O15457 AC093809.1-201ENST00000509155 340 ntBASIC2.64□□□□□ -1.99
MSH4O15457 AC098799.2-201ENST00000509466 868 ntBASIC2.64□□□□□ -1.99
MSH4O15457 RNA5SP281-201ENST00000516504 135 ntBASIC2.64□□□□□ -1.99
MSH4O15457 AP002748.2-201ENST00000528671 348 ntBASIC2.64□□□□□ -1.99
MSH4O15457 DUXAP1-201ENST00000556632 463 ntBASIC2.64□□□□□ -1.99
MSH4O15457 AMZ2P1-203ENST00000565833 850 ntBASIC2.64□□□□□ -1.99
MSH4O15457 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.64□□□□□ -1.99
MSH4O15457 AC060766.3-201ENST00000591442 263 ntBASIC2.64□□□□□ -1.99
MSH4O15457 DUXAP4-201ENST00000603046 613 ntBASIC2.64□□□□□ -1.99
MSH4O15457 AL138713.1-201ENST00000624026 2130 ntBASIC2.64□□□□□ -1.99
MSH4O15457 PCMTD1P7-201ENST00000634506 357 ntBASIC2.64□□□□□ -1.99
MSH4O15457 ZNF876P-202ENST00000398732 1485 ntBASIC2.64□□□□□ -1.99
MSH4O15457 AC007785.2-201ENST00000598627 1916 ntBASIC2.64□□□□□ -1.99
MSH4O15457 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MSH4O15457 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
MSH4O15457 FAM133CP-201ENST00000332869 704 ntBASIC2.63□□□□□ -1.99
MSH4O15457 RNA5SP139-201ENST00000364340 117 ntBASIC2.63□□□□□ -1.99
MSH4O15457 RNU6-432P-201ENST00000384196 109 ntBASIC2.63□□□□□ -1.99
MSH4O15457 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
MSH4O15457 AL590084.2-201ENST00000401481 382 ntBASIC2.63□□□□□ -1.99
MSH4O15457 Z85995.1-201ENST00000415547 335 ntBASIC2.63□□□□□ -1.99
MSH4O15457 ATG3P1-201ENST00000419507 911 ntBASIC2.63□□□□□ -1.99
MSH4O15457 RPS20P20-201ENST00000460498 340 ntBASIC2.63□□□□□ -1.99
MSH4O15457 LARP1BP2-201ENST00000486594 519 ntBASIC2.63□□□□□ -1.99
MSH4O15457 LINC00888-204ENST00000487386 421 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC135721.1-201ENST00000497954 479 ntBASIC2.63□□□□□ -1.99
MSH4O15457 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.63□□□□□ -1.99
MSH4O15457 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.63□□□□□ -1.99
MSH4O15457 RNA5SP24-201ENST00000516478 95 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC105185.1-201ENST00000518705 535 ntBASIC2.63□□□□□ -1.99
MSH4O15457 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.63□□□□□ -1.99
MSH4O15457 MTCO2P15-201ENST00000532655 656 ntBASIC2.63□□□□□ -1.99
MSH4O15457 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
MSH4O15457 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.63□□□□□ -1.99
MSH4O15457 AC091544.4-201ENST00000555268 342 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC087465.1-201ENST00000560574 245 ntBASIC2.63□□□□□ -1.99
MSH4O15457 SNORD53-201ENST00000579969 78 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC060771.1-201ENST00000582031 164 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.63□□□□□ -1.99
MSH4O15457 UBE2L4-201ENST00000587688 464 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AL356575.1-201ENST00000603008 283 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AL139344.1-201ENST00000605228 195 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC092106.3-201ENST00000611308 722 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC013476.2-201ENST00000614456 459 ntBASIC2.63□□□□□ -1.99
MSH4O15457 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.63□□□□□ -1.99
MSH4O15457 AL161629.2-201ENST00000615347 275 ntBASIC2.63□□□□□ -1.99
MSH4O15457 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.63□□□□□ -1.99
MSH4O15457 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC009159.1-201ENST00000618386 642 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AL590808.1-201ENST00000618696 141 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AL391262.2-201ENST00000622466 494 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AL158801.5-201ENST00000623123 465 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC073308.1-201ENST00000623696 305 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AL356596.1-201ENST00000624230 379 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AL049641.1-201ENST00000441055 1948 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC010680.1-201ENST00000590024 3590 ntBASIC2.63□□□□□ -1.99
MSH4O15457 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MSH4O15457 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MSH4O15457 AC009902.3-201ENST00000606235 2172 ntBASIC2.63□□□□□ -1.99
MSH4O15457 AC099654.7-201ENST00000635788 2127 ntBASIC2.62□□□□□ -1.99
MSH4O15457 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
MSH4O15457 SNORA25.6-201ENST00000364121 118 ntBASIC2.62□□□□□ -1.99
MSH4O15457 DEFA7P-201ENST00000382676 285 ntBASIC2.62□□□□□ -1.99
MSH4O15457 RNU6-1035P-201ENST00000384477 107 ntBASIC2.62□□□□□ -1.99
MSH4O15457 MTND4P13-201ENST00000402078 1023 ntBASIC2.62□□□□□ -1.99
MSH4O15457 RN7SKP266-201ENST00000410232 287 ntBASIC2.62□□□□□ -1.99
MSH4O15457 RNA5SP508-201ENST00000411327 119 ntBASIC2.62□□□□□ -1.99
MSH4O15457 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.62□□□□□ -1.99
MSH4O15457 RPS15AP28-201ENST00000435088 386 ntBASIC2.62□□□□□ -1.99
MSH4O15457 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.62□□□□□ -1.99
MSH4O15457 RPL35AP22-201ENST00000436855 335 ntBASIC2.62□□□□□ -1.99
MSH4O15457 RSU1P2-202ENST00000437884 485 ntBASIC2.62□□□□□ -1.99
MSH4O15457 CBWD4P-201ENST00000445695 655 ntBASIC2.62□□□□□ -1.99
MSH4O15457 TPT1P14-201ENST00000448018 505 ntBASIC2.62□□□□□ -1.99
MSH4O15457 AC008571.1-201ENST00000467232 300 ntBASIC2.62□□□□□ -1.99
MSH4O15457 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.62□□□□□ -1.99
MSH4O15457 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.62□□□□□ -1.99
MSH4O15457 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.62□□□□□ -1.99
MSH4O15457 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.62□□□□□ -1.99
MSH4O15457 RAC1P5-201ENST00000512182 576 ntBASIC2.62□□□□□ -1.99
MSH4O15457 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.62□□□□□ -1.99
MSH4O15457 RNU6-1282P-201ENST00000516735 96 ntBASIC2.62□□□□□ -1.99
MSH4O15457 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.62□□□□□ -1.99
MSH4O15457 AC025281.1-201ENST00000567026 265 ntBASIC2.62□□□□□ -1.99
MSH4O15457 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.62□□□□□ -1.99
MSH4O15457 MIR3945-201ENST00000581853 98 ntBASIC2.62□□□□□ -1.99
MSH4O15457 MIR5007-201ENST00000583098 95 ntBASIC2.62□□□□□ -1.99
MSH4O15457 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.62□□□□□ -1.99
MSH4O15457 TPMTP1-201ENST00000592307 737 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms