Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RPS12P5-201ENST00000423449 371 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 SRIP2-201ENST00000428470 166 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXN1O15353 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXN1O15353 CACYBPP2-201ENST00000453625 678 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXN1O15353 MTND4P17-201ENST00000470444 350 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC233702.1-201ENST00000482905 502 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 EIF4EP3-201ENST00000498782 656 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 TMEM251P1-201ENST00000503717 318 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXN1O15353 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXN1O15353 AC093677.1-201ENST00000514414 678 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 RNU6-1220P-201ENST00000517126 108 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 RNU6-1314P-201ENST00000517139 104 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC123904.2-201ENST00000548059 300 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXN1O15353 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXN1O15353 AC011468.4-201ENST00000603942 409 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC016925.2-201ENST00000605108 242 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AL008729.2-201ENST00000606393 473 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC090425.1-201ENST00000610007 140 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 BX664608.1-201ENST00000610519 487 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AL354950.2-201ENST00000617939 290 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXN1O15353 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXN1O15353 AC040168.1-201ENST00000623594 991 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AL137790.1-201ENST00000634283 177 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXN1O15353 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN1O15353 AC025125.1-201ENST00000624743 1922 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN1O15353 AC073073.2-201ENST00000609827 2578 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN1O15353 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN1O15353 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
FOXN1O15353 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
FOXN1O15353 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN1O15353 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN1O15353 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN1O15353 RNU4-1-201ENST00000363925 141 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 RNU6-169P-201ENST00000365336 107 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN1O15353 SNORA20.2-201ENST00000383922 131 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 RNU6-730P-201ENST00000383954 104 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 RNU6-1105P-201ENST00000384774 107 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 HMGB1P17-201ENST00000403495 628 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 RNU6-603P-201ENST00000411403 107 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN1O15353 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN1O15353 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN1O15353 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN1O15353 RPL31P50-201ENST00000471002 296 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN1O15353 AC010587.1-201ENST00000505809 469 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 SNORA70.18-201ENST00000516696 98 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 NARSP2-201ENST00000518524 679 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 SUB1P1-201ENST00000524415 382 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN1O15353 AC026464.5-201ENST00000562497 722 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 FRG2DP-202ENST00000566967 323 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 AC100830.2-201ENST00000581636 240 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 MIR3118-1-201ENST00000581787 76 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN1O15353 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN1O15353 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXN1O15353 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXN1O15353 AL133216.2-202ENST00000634512 349 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN1O15353 OR4G1P-203ENST00000641984 1631 ntBASIC4.27□□□□□ -1.73
FOXN1O15353 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
FOXN1O15353 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
FOXN1O15353 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN1O15353 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
FOXN1O15353 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN1O15353 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
FOXN1O15353 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN1O15353 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN1O15353 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
FOXN1O15353 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FOXN1O15353 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN1O15353 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
FOXN1O15353 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN1O15353 AC011155.1-201ENST00000316512 456 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN1O15353 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FOXN1O15353 AL445529.1-201ENST00000398713 389 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 DHFRP6-201ENST00000401776 268 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AL356057.3-201ENST00000402607 340 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AL136116.1-201ENST00000403591 381 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 Y_RNA.605-201ENST00000410577 105 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AC078974.1-201ENST00000411597 223 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXN1O15353 AC234782.4-201ENST00000417646 1048 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AL645937.1-202ENST00000421799 937 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AC233981.1-201ENST00000423224 461 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXN1O15353 AL353777.1-201ENST00000425552 326 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 DUTP6-201ENST00000425573 462 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms