Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM38O00635 SNORA63.1-201ENST00000362493 131 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 Y_RNA.86-201ENST00000363020 111 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 RNU1-18P-201ENST00000363062 164 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 SNORD35B-201ENST00000363660 87 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 U3.11-201ENST00000364476 212 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 Y_RNA.333-201ENST00000365274 102 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TRIM38O00635 TXNP7-201ENST00000406296 293 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 PDCL2P1-201ENST00000419302 352 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 RPS15AP12-201ENST00000419498 388 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 MTCO2P12-201ENST00000427426 682 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM38O00635 NANOGP10-201ENST00000453325 895 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 KCTD9P5-201ENST00000504141 1170 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 HMGB1P29-201ENST00000505659 499 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM38O00635 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM38O00635 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM38O00635 Vault.3-201ENST00000516676 95 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 RNA5SP337-201ENST00000517007 109 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM38O00635 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM38O00635 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM38O00635 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TRIM38O00635 AC078814.3-201ENST00000553036 491 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AL512360.1-201ENST00000555346 234 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AC025678.1-201ENST00000567861 338 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AF038458.1-201ENST00000588406 262 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AC013553.2-201ENST00000604244 589 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 BNIP3P10-201ENST00000605360 577 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AC116312.1-201ENST00000606841 314 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM38O00635 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM38O00635 AC079684.1-201ENST00000621405 437 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM38O00635 AC110994.2-201ENST00000635481 492 ntBASIC3.91□□□□□ -1.78
TRIM38O00635 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM38O00635 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM38O00635 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM38O00635 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM38O00635 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM38O00635 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM38O00635 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
TRIM38O00635 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM38O00635 AC002546.1-201ENST00000588041 2504 ntBASIC3.9□□□□□ -1.78
TRIM38O00635 UBE3AP2-201ENST00000429033 2259 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM38O00635 OR1S2-201ENST00000302592 978 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 RNU6-511P-201ENST00000363496 107 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 U8.11-201ENST00000384699 133 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 U8.12-201ENST00000384701 133 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TRIM38O00635 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM38O00635 AL359634.1-202ENST00000404721 284 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AL138878.1-201ENST00000405131 347 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 SNORA57.3-201ENST00000411095 141 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM38O00635 MTND3P17-201ENST00000416968 344 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 ZNF90P2-204ENST00000419323 1075 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM38O00635 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM38O00635 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM38O00635 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM38O00635 TXNP1-201ENST00000441872 371 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 U8.18-201ENST00000459285 133 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AC068305.1-201ENST00000497406 726 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AC026726.1-201ENST00000512859 601 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM38O00635 Y_RNA.693-201ENST00000516641 110 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 RNU7-143P-201ENST00000516781 65 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 RNA5SP179-201ENST00000517284 121 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM38O00635 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM38O00635 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM38O00635 CYCSP30-201ENST00000546447 172 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM38O00635 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM38O00635 AC055876.1-202ENST00000567053 138 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AC007151.1-201ENST00000572774 483 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AC007363.1-201ENST00000604736 620 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AC091167.4-201ENST00000605079 184 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM38O00635 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM38O00635 AC118273.1-201ENST00000525324 3006 ntBASIC3.9□□□□□ -1.79
TRIM38O00635 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM38O00635 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM38O00635 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM38O00635 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM38O00635 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM38O00635 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM38O00635 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TRIM38O00635 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM38O00635 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
TRIM38O00635 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TRIM38O00635 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM38O00635 ZNF285B-201ENST00000561698 1767 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms