Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC28A1O00337 MTND5P1-201ENST00000445440 1375 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AL445523.1-201ENST00000451184 1362 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC28A1O00337 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC28A1O00337 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC28A1O00337 RNU5F-6P-201ENST00000362979 116 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 RNU6-1167P-201ENST00000363227 94 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 MIR888-201ENST00000401186 77 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 NDUFS5P1-201ENST00000405668 289 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 USP9YP13-201ENST00000417797 480 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC28A1O00337 MTND4P20-201ENST00000424125 869 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 MTND5P25-201ENST00000430499 799 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC28A1O00337 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC28A1O00337 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC28A1O00337 AL590639.1-201ENST00000456484 337 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 RPL26P9-201ENST00000457466 433 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AL358832.1-201ENST00000497800 389 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC114786.4-201ENST00000508771 728 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC114797.1-201ENST00000514003 728 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC28A1O00337 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC28A1O00337 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC28A1O00337 AC008015.1-201ENST00000555505 465 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 H3F3AP1-201ENST00000559984 334 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC020895.1-201ENST00000595362 272 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AP001981.2-201ENST00000603241 418 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC121334.2-201ENST00000605387 271 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC108747.1-201ENST00000609508 535 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC107871.2-201ENST00000612894 502 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC140725.3-201ENST00000616193 880 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 AC010149.2-201ENST00000637608 315 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 OR8B1P-202ENST00000641132 1178 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC28A1O00337 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC28A1O00337 AC000403.1-201ENST00000613696 3585 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 SNORA71.3-201ENST00000362582 128 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 RNU5F-7P-201ENST00000363696 115 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 RNY3P13-201ENST00000365542 102 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 SNORD21-201ENST00000383953 95 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC28A1O00337 RNU2-62P-201ENST00000410868 191 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC28A1O00337 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
SLC28A1O00337 AC005005.2-201ENST00000420779 380 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC009414.1-201ENST00000427200 443 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC022018.1-201ENST00000430685 241 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 SNRPEP9-201ENST00000436794 238 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AL512286.1-201ENST00000439244 400 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 CYCSP32-201ENST00000440548 321 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.75□□□□□ -1.97
SLC28A1O00337 ZNF114P1-201ENST00000453500 292 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC28A1O00337 AC112204.1-201ENST00000502591 103 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 MTCYBP35-201ENST00000503630 1137 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 SUMO2P6-201ENST00000505273 288 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC28A1O00337 SCGB1D5P-201ENST00000515134 247 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 RNA5SP76-201ENST00000516277 87 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 Y_RNA.717-201ENST00000517106 92 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC022616.6-201ENST00000520479 119 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AP002404.1-201ENST00000532005 451 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 LRRC34P1-201ENST00000542742 915 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC28A1O00337 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.75□□□□□ -1.97
SLC28A1O00337 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 HMGN2P15-201ENST00000585707 270 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC018638.7-201ENST00000605836 1114 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AL391813.2-201ENST00000609113 322 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC131902.3-201ENST00000611767 581 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AL359198.2-201ENST00000611836 194 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC034102.8-201ENST00000615146 484 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 uc_338.12-201ENST00000616344 181 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 AC244100.1-202ENST00000621554 382 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC28A1O00337 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SLC28A1O00337 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC28A1O00337 PABPC1P9-201ENST00000426076 1612 ntBASIC2.75□□□□□ -1.97
SLC28A1O00337 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLC28A1O00337 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC28A1O00337 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC28A1O00337 RNU6-884P-201ENST00000363889 107 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 RNU6-533P-201ENST00000384144 107 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 MIR23B-201ENST00000384832 97 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 RNU6-193P-201ENST00000410977 107 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC28A1O00337 AC006366.1-201ENST00000422002 759 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC28A1O00337 SAR1AP4-201ENST00000429225 591 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 HMGB1P27-201ENST00000431429 603 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms