Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC188H7C350 ROCK1P1-201ENST00000573767 549 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 AC005951.1-201ENST00000576706 485 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC188H7C350 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC023043.3-201ENST00000593113 385 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AL022161.1-201ENST00000604390 213 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 AC012468.1-201ENST00000604888 430 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AL589994.2-201ENST00000621124 579 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 MIR6733-201ENST00000635723 61 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 MTND1P37-201ENST00000636562 264 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 AC092104.1-201ENST00000497346 1441 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
CCDC188H7C350 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CCDC188H7C350 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC022336.2-201ENST00000568966 2538 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 MIR22-201ENST00000362190 85 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 MIR34B-201ENST00000385076 84 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC188H7C350 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC188H7C350 RNA5SP354-201ENST00000391247 136 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 SNORA11.2-201ENST00000408318 127 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC188H7C350 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC188H7C350 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AC104651.1-201ENST00000427559 735 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC188H7C350 MTATP6P30-201ENST00000443540 664 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 Z75741.1-201ENST00000446793 314 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC188H7C350 ASNSP3-201ENST00000451989 1306 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AC013267.1-201ENST00000458227 267 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 SETP11-201ENST00000473027 690 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC188H7C350 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC188H7C350 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC188H7C350 MIR3915-201ENST00000578518 97 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AF131215.7-201ENST00000602443 707 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC188H7C350 AP000860.1-201ENST00000605250 559 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AL160281.1-201ENST00000605307 311 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AL136363.1-201ENST00000605349 337 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC188H7C350 AL031775.1-201ENST00000607014 887 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AL391813.2-201ENST00000609113 322 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC188H7C350 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC188H7C350 AC091953.5-201ENST00000622919 233 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 AC078883.4-201ENST00000623218 367 ntBASIC3.06□□□□□ -1.92
CCDC188H7C350 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
CCDC188H7C350 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC188H7C350 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC188H7C350 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC188H7C350 RNU1-105P-201ENST00000363470 161 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 RNU6-701P-201ENST00000384059 107 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC188H7C350 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC188H7C350 AC107081.1-201ENST00000414975 361 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 USP9YP13-201ENST00000417797 480 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 RAC1P6-201ENST00000423911 575 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 AL356583.2-201ENST00000426536 280 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC188H7C350 AC010153.1-201ENST00000432862 727 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC188H7C350 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC188H7C350 TRIM60P18-201ENST00000441518 828 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC188H7C350 ST13P20-201ENST00000447996 1065 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC188H7C350 RPL12P25-201ENST00000455592 494 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 MTCO2P6-201ENST00000463134 685 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC188H7C350 RNU6-927P-201ENST00000516199 100 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 RN7SKP258-201ENST00000517151 304 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC188H7C350 AC011979.2-201ENST00000527568 352 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 MRPS36P5-201ENST00000551909 298 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 AL157394.1-201ENST00000562983 1224 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 MIR4293-201ENST00000584305 78 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 BX664608.1-201ENST00000610519 487 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 uc_338.12-201ENST00000616344 181 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC188H7C350 AC073346.2-201ENST00000624724 2058 ntBASIC3.05□□□□□ -1.92
CCDC188H7C350 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC188H7C350 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC188H7C350 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC188H7C350 MTCO1P12-201ENST00000414273 1543 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 RNU6-270P-201ENST00000364131 105 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 RNA5SP72-201ENST00000364442 117 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 MIR512-1-201ENST00000384913 84 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 MT-TH-201ENST00000387441 69 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 MIR887-201ENST00000401258 79 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC188H7C350 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms