Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AC006199.1-201ENST00000548728 219 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 MIR5571-201ENST00000577998 113 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AL451007.1-201ENST00000595491 289 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AC008121.1-201ENST00000603244 268 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AL021997.1-201ENST00000605757 193 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AL355472.4-201ENST00000610233 626 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 BX664608.1-201ENST00000610519 487 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2□□□□□ -2.09
SMKR1H3BMG3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2□□□□□ -2.09
SMKR1H3BMG3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2□□□□□ -2.09
SMKR1H3BMG3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SMKR1H3BMG3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2□□□□□ -2.09
SMKR1H3BMG3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2□□□□□ -2.09
SMKR1H3BMG3 RNU6-931P-201ENST00000363850 107 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 RNA5SP515-201ENST00000364570 118 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2□□□□□ -2.09
SMKR1H3BMG3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2□□□□□ -2.09
SMKR1H3BMG3 RNU6-157P-201ENST00000383957 107 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 RNU6-658P-201ENST00000384606 106 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2□□□□□ -2.09
SMKR1H3BMG3 NDUFS5P1-201ENST00000405668 289 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 RNU6-920P-201ENST00000410926 92 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AC106883.1-201ENST00000418805 562 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2□□□□□ -2.09
SMKR1H3BMG3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2□□□□□ -2.09
SMKR1H3BMG3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2□□□□□ -2.09
SMKR1H3BMG3 AC097713.2-201ENST00000430199 356 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AL161651.1-201ENST00000440882 223 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 RPL7P36-201ENST00000444633 681 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2□□□□□ -2.09
SMKR1H3BMG3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2□□□□□ -2.09
SMKR1H3BMG3 AC133134.1-201ENST00000466800 359 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AP002812.1-201ENST00000495378 474 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AC119751.4-201ENST00000507498 357 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2□□□□□ -2.09
SMKR1H3BMG3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SMKR1H3BMG3 SNORA31.15-201ENST00000516771 132 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AC009812.2-201ENST00000517657 457 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2□□□□□ -2.09
SMKR1H3BMG3 DUXAP1-201ENST00000556632 463 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2□□□□□ -2.09
SMKR1H3BMG3 MIR3167-201ENST00000579623 85 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2□□□□□ -2.09
SMKR1H3BMG3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2□□□□□ -2.09
SMKR1H3BMG3 AL139022.2-201ENST00000606934 443 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2□□□□□ -2.09
SMKR1H3BMG3 AC011939.3-201ENST00000613686 466 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AC013470.4-201ENST00000619978 986 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AC026422.1-201ENST00000623961 452 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 AC006927.4-201ENST00000639187 543 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2□□□□□ -2.09
SMKR1H3BMG3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2□□□□□ -2.09
SMKR1H3BMG3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SMKR1H3BMG3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
SMKR1H3BMG3 MTND5P30-201ENST00000452896 1731 ntBASIC2□□□□□ -2.09
SMKR1H3BMG3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2□□□□□ -2.09
SMKR1H3BMG3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 NACAP2-201ENST00000318548 624 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 MIR26A1-201ENST00000362205 77 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 SNORA71.1-201ENST00000364523 117 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 RNU6-83P-201ENST00000384568 112 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 RNU6-925P-201ENST00000384629 104 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 MIR218-1-201ENST00000384999 110 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 MTCO2P8-201ENST00000412213 658 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC018644.1-201ENST00000429934 551 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC006028.1-201ENST00000438379 402 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC004854.1-201ENST00000440356 349 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AL133547.1-201ENST00000448546 220 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 NIPA2P5-201ENST00000452282 464 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC006445.1-201ENST00000491925 405 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC104685.1-201ENST00000502445 371 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 RNA5SP367-201ENST00000516557 118 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC090136.1-201ENST00000520009 240 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 HMGB1P41-201ENST00000520234 440 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AP006587.4-201ENST00000526053 529 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC087276.1-201ENST00000529659 480 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 TMF1P1-201ENST00000576058 373 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 MTCO2P2-201ENST00000591258 225 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms