Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 UBE2D3P2-201ENST00000424409 445 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC006548.1-201ENST00000427470 102 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 OR4K11P-201ENST00000431829 904 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC098826.1-201ENST00000433943 471 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 UBE2FP3-201ENST00000436366 524 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC107083.1-201ENST00000439643 279 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AL831737.1-201ENST00000441288 271 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 Z82190.1-201ENST00000454534 490 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 MTCO1P42-201ENST00000457379 726 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC097462.2-201ENST00000504623 481 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC006390.1-201ENST00000508068 283 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC093809.1-201ENST00000509155 340 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-678P-201ENST00000516832 109 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 HSPA8P13-201ENST00000523715 472 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC007115.1-201ENST00000546853 234 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 MIR5697-201ENST00000578045 78 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 COX6CP3-201ENST00000580869 223 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 MIR4307-201ENST00000582802 84 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 RSL24D1P11-201ENST00000591045 491 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC119751.7-201ENST00000600494 245 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC012065.4-201ENST00000602445 679 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AP000403.1-201ENST00000603349 851 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC098614.4-201ENST00000607601 462 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC027807.2-201ENST00000616099 408 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC012150.2-201ENST00000621300 544 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 CR381572.1-201ENST00000625098 102 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC091564.4-201ENST00000533934 2194 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AC092104.1-201ENST00000497346 1441 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 ELL2P3-201ENST00000457883 1602 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 DDX43P2-201ENST00000604753 1354 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-462P-201ENST00000362659 105 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 CD24P4-201ENST00000382840 243 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-878P-201ENST00000384578 110 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 MIR634-201ENST00000385208 97 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 U3.26-201ENST00000391236 204 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 MIR1289-1-201ENST00000408836 144 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 RNA5SP38-201ENST00000410750 119 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC078974.1-201ENST00000411597 223 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC083875.1-201ENST00000419509 405 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AL365338.1-201ENST00000422282 858 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 MTND4P20-201ENST00000424125 869 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AL512286.1-201ENST00000439244 400 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 SDCBPP1-201ENST00000440192 890 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 RPL23AP58-201ENST00000440453 469 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC096576.1-201ENST00000489014 359 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 COX7A2P2-201ENST00000505291 250 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC116347.2-201ENST00000514912 523 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 RNU1-103P-201ENST00000516502 125 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 RNA5SP367-201ENST00000516557 118 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC106038.2-201ENST00000520706 568 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AP004247.1-201ENST00000531556 1289 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 DNAJC8P1-201ENST00000554535 372 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AP001004.1-201ENST00000582468 324 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 PIGPP4-201ENST00000584447 307 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC004223.2-201ENST00000590309 544 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 RPL23AP92-201ENST00000603609 255 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AL645944.1-201ENST00000603857 493 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC104237.2-201ENST00000612456 443 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AC004696.1-201ENST00000614345 607 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 AL590099.1-201ENST00000615276 138 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
TRIM49D1C9J1S8 CCT4P2-201ENST00000233836 1548 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms