Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 RNU6-928P-201ENST00000516876 104 ntBASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 OR5AL2P-201ENST00000532185 920 ntBASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 MTCYBP23-201ENST00000558717 1102 ntBASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 MIR3609-201ENST00000582661 80 ntBASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 MIR7515-201ENST00000637837 67 ntBASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 ZNF702P-202ENST00000434269 1966 ntBASIC0.86□□□□□ -2.27
CPSF4LA6NMK7 Y_RNA.327-201ENST00000365201 102 ntBASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 MIR493-201ENST00000385254 89 ntBASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 FGF7P8-201ENST00000402994 292 ntBASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AIMP1P2-201ENST00000425294 312 ntBASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 RPL7L1P10-201ENST00000427790 463 ntBASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC068781.1-201ENST00000488231 618 ntBASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC108157.1-201ENST00000510511 539 ntBASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.85□□□□□ -2.27
CPSF4LA6NMK7 AC008555.8-201ENST00000623602 2168 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 AL161781.1-201ENST00000354277 403 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 RNU5D-1-201ENST00000363299 116 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 RNU6-244P-201ENST00000391028 104 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 RNA5SP465-201ENST00000391195 109 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 HMGB3P31-201ENST00000413333 595 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 VN1R36P-201ENST00000414936 291 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 RPL30P4-201ENST00000429309 333 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 AL163540.1-201ENST00000485382 386 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 AC133963.2-201ENST00000513686 578 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 AP005660.1-201ENST00000522972 293 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 CBX3P8-201ENST00000532412 525 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 SNRPGP16-201ENST00000533275 226 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 AC090525.3-201ENST00000605601 189 ntBASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CPSF4LA6NMK7 RNU6-220P-201ENST00000390919 107 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 AC096920.1-201ENST00000423991 241 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 AL592045.1-201ENST00000429867 352 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 AC124916.1-201ENST00000444020 547 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 RPS27P1-201ENST00000450552 247 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 PNPLA4P1-201ENST00000458328 305 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 DYNLL1P5-201ENST00000467158 270 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 IGKV2D-36-201ENST00000518643 226 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 MIR4529-201ENST00000578110 78 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 AC104984.5-201ENST00000586878 94 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 AL009028.1-201ENST00000604895 802 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 AC111188.2-201ENST00000529697 1387 ntBASIC0.83□□□□□ -2.28
CPSF4LA6NMK7 AL161722.3-201ENST00000605789 2983 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 CYCSP48-201ENST00000417124 323 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AC098614.2-201ENST00000426040 255 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 Z82205.1-201ENST00000428456 297 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 RPL23AP6-201ENST00000446637 472 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 PRELID3BP4-201ENST00000515476 571 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 RNA5SP458-201ENST00000516188 119 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 SCARNA17.1-201ENST00000516211 143 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 SCARNA17.2-201ENST00000516334 143 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 LINC00933-203ENST00000559812 219 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 OR4G1P-201ENST00000588632 938 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 SCARNA17.4-201ENST00000614296 143 ntBASIC0.82□□□□□ -2.28
CPSF4LA6NMK7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 RNU1-148P-201ENST00000384472 162 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 RNA5SP56-201ENST00000410277 118 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 RNU4-78P-201ENST00000410940 126 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 MTCYBP3-201ENST00000445588 1137 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 RPL21P134-201ENST00000453468 483 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms