Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 AP004242.1-201ENST00000533701 349 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 AC022655.2-201ENST00000577280 318 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 ZNF826P-207ENST00000622273 1910 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 RN7SKP44-201ENST00000363602 316 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 Y_RNA.378-201ENST00000365652 113 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 RNU6-116P-201ENST00000384042 109 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AL356432.1-201ENST00000405809 419 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AL031121.1-201ENST00000406553 254 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC079809.1-201ENST00000415468 276 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 RPL7P10-201ENST00000417407 739 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 NCOR1P3-201ENST00000420479 303 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 COTL1P1-201ENST00000422309 375 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 MTND4P28-201ENST00000426217 387 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 TAAR7P-201ENST00000436141 242 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 SCARNA18-201ENST00000459004 134 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 RNU6-329P-201ENST00000459618 107 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC025518.1-201ENST00000479856 347 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 RN7SKP256-201ENST00000517201 314 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC090151.1-201ENST00000520784 730 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 MIR3690-201ENST00000580266 75 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 uc_338.5-201ENST00000611839 155 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 AC103705.1-201ENST00000619013 241 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC85CA6NKD9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 RNA5SP50-201ENST00000363731 107 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 CISD1P1-201ENST00000393907 327 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 RNA5SP293-201ENST00000410527 113 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 RNA5SP120-201ENST00000410900 112 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 OOSP1P1-201ENST00000423265 274 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AL160275.3-201ENST00000423876 471 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AL669831.1-202ENST00000428504 417 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AL365400.1-201ENST00000431854 640 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 VDAC1P3-201ENST00000434069 851 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 GTF2IP13-201ENST00000438487 386 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 UBE2V1P7-201ENST00000446395 340 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 RPL21P93-201ENST00000480465 489 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AP001086.1-201ENST00000494882 321 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 RN7SKP18-201ENST00000516005 275 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 HMGB1P19-201ENST00000517578 577 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 BTF3P12-201ENST00000519620 469 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 ATP5F1P5-201ENST00000526403 760 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC004024.1-201ENST00000549244 247 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC087499.8-201ENST00000578406 226 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 MIR4742-201ENST00000581069 85 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AL670379.4-201ENST00000605279 254 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AC087045.1-201ENST00000605856 382 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AL022345.1-201ENST00000607292 135 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 AP003400.5-201ENST00000624827 617 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 HSPA8P4-201ENST00000511877 1920 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 PNPT1P2-201ENST00000456768 2050 ntBASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC85CA6NKD9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms