Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL138889.2-201ENST00000603883 242 ntBASIC4.46□□□□□ -1.7
CCDC66A2RUB6 AC113403.1-201ENST00000604910 193 ntBASIC4.46□□□□□ -1.7
CCDC66A2RUB6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC66A2RUB6 AL365204.3-201ENST00000612448 685 ntBASIC4.46□□□□□ -1.7
CCDC66A2RUB6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC66A2RUB6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC66A2RUB6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC66A2RUB6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC66A2RUB6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC66A2RUB6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 SNORA63-201ENST00000363450 132 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 SNORD113-7-201ENST00000363762 77 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 Y_RNA.301-201ENST00000364990 103 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 RNU6-1074P-201ENST00000383995 104 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 RNU6-1127P-201ENST00000384580 107 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 RNU6-328P-201ENST00000390887 106 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 POLHP1-201ENST00000411806 470 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AL356387.2-201ENST00000422272 243 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AL732292.1-201ENST00000426692 226 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC018644.1-201ENST00000429934 551 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC024082.2-201ENST00000434771 238 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC236972.2-201ENST00000434979 310 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 SCARNA18-201ENST00000459004 134 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 ERHP1-201ENST00000523006 310 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AP000763.2-201ENST00000540641 163 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC063950.1-201ENST00000552036 308 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 RPL23AP84-201ENST00000571193 464 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 MIR3186-201ENST00000577404 85 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 MIR5096-201ENST00000583713 70 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC092747.3-201ENST00000603769 301 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AL670379.4-201ENST00000605279 254 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC007619.2-201ENST00000605743 379 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC015967.1-201ENST00000619893 476 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 MIR6810-201ENST00000622701 70 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 AC140479.6-201ENST00000633535 357 ntBASIC4.45□□□□□ -1.7
CCDC66A2RUB6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC66A2RUB6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 RNU6-190P-201ENST00000384154 102 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 RPEP3-201ENST00000425462 676 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 MTATP6P4-201ENST00000427725 675 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 C4BPAP2-201ENST00000428434 478 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 RPL23AP1-201ENST00000428990 471 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC011998.1-201ENST00000433403 117 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 NDUFA5P4-201ENST00000436704 385 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AL359073.1-201ENST00000448036 403 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 RPS15AP27-201ENST00000449183 343 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 HMGB3P8-201ENST00000449709 577 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 Vault.1-201ENST00000516474 102 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 RNA5SP73-201ENST00000516744 108 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 MIR4284-201ENST00000578924 81 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AL161729.3-201ENST00000603533 673 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC104763.2-201ENST00000604179 382 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AL133255.1-201ENST00000606374 441 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 Z82243.1-201ENST00000609432 473 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 uc_338.15-201ENST00000615470 191 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AL359547.2-201ENST00000615810 418 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC092628.2-201ENST00000622492 339 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 AC008013.2-202ENST00000637965 364 ntBASIC4.44□□□□□ -1.7
CCDC66A2RUB6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms