Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC013444.2-201ENST00000603317 787 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-88P-201ENST00000606801 100 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC004067.1-201ENST00000608733 700 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC108747.1-201ENST00000609508 535 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AL355472.4-201ENST00000610233 626 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC004223.4-201ENST00000612426 332 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 PABPC1P9-201ENST00000426076 1612 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC092125.1-201ENST00000562568 1995 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC110774.1-201ENST00000623567 2018 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 Y_RNA.18-201ENST00000362461 102 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-553P-201ENST00000364047 96 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MIR518C-201ENST00000384822 101 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC109780.2-201ENST00000413467 845 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 RPL7P10-201ENST00000417407 739 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC234781.2-201ENST00000426370 994 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MTATP6P17-201ENST00000431030 672 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 HMGB1P12-201ENST00000438594 598 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MTATP6P30-201ENST00000443540 664 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 PAXBP1P1-201ENST00000449315 447 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 SSXP4-201ENST00000451349 245 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 KATNBL1P6-201ENST00000453433 915 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC128713.1-201ENST00000471495 306 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 SETP11-201ENST00000473027 690 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AL049874.1-201ENST00000489560 388 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC135721.1-201ENST00000497954 479 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 ANXA2P1-201ENST00000505539 926 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AF131216.2-201ENST00000512316 564 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MTCO2P32-201ENST00000514865 403 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MTND5P4-201ENST00000514978 288 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-232P-201ENST00000517144 64 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC090888.1-201ENST00000561335 1141 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC012182.1-201ENST00000570133 895 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MIR3915-201ENST00000578518 97 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC090616.2-202ENST00000584248 222 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MIR548AB-201ENST00000584917 84 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AP000403.1-201ENST00000603349 851 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 MTCYBP22-201ENST00000603788 447 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC106028.5-201ENST00000610332 395 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC104010.1-201ENST00000616889 150 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC092447.10-201ENST00000620607 1652 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 AC007494.3-201ENST00000624660 743 ntBASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV40A0A0B4J280 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 AL445523.1-201ENST00000451184 1362 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 RNU5F-6P-201ENST00000362979 116 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-1078P-201ENST00000364522 103 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-76P-201ENST00000384060 104 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-809P-201ENST00000384461 107 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 U8.14-201ENST00000390843 143 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 AL591034.1-201ENST00000407447 340 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-920P-201ENST00000410926 92 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 AC009963.1-201ENST00000417265 157 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 AC104332.2-201ENST00000429959 156 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 UBE2FP3-201ENST00000436366 524 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 BZW1P2-201ENST00000473537 826 ntBASIC2.03□□□□□ -2.08
TRAV40A0A0B4J280 AC104563.1-201ENST00000476147 376 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms