Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 DEFB122-202ENST00000569013 197 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC078899.2-201ENST00000595282 212 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 YWHAEP7-203ENST00000622054 312 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 ZNF355P-201ENST00000427301 3216 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-792P-201ENST00000363490 107 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 U3.12-201ENST00000364498 214 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 SUGT1P1-201ENST00000379514 476 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-481P-201ENST00000384194 107 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 SNORA70B-201ENST00000384210 135 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-750P-201ENST00000390946 107 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 GSTA9P-201ENST00000406231 611 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU2-28P-201ENST00000410457 189 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 HMGB1P49-201ENST00000418882 569 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 RPL31P63-201ENST00000422565 375 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AL691517.1-201ENST00000440833 1235 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 OSTCP8-201ENST00000445117 448 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 VN1R10P-201ENST00000447106 875 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 RPL7P18-201ENST00000478965 734 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 RPL21P99-201ENST00000480369 423 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC023141.11-201ENST00000508864 202 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 MRPS17P9-201ENST00000511924 393 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC022447.1-201ENST00000515358 464 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 HMGB1P1-201ENST00000522557 636 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AP003066.2-201ENST00000529375 555 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 MIR5571-201ENST00000577998 113 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC136601.2-201ENST00000604356 474 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC004853.1-201ENST00000604902 698 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC068057.2-201ENST00000624047 895 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC243829.7-201ENST00000633081 225 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 U6.101-201ENST00000637707 76 ntBASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-1A0A0B4J248 AC005832.2-201ENST00000538921 1430 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 OR4G2P-202ENST00000641004 1759 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 CCDC58P2-201ENST00000417131 366 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AL590233.1-201ENST00000430017 456 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 KLF3P2-201ENST00000465138 268 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 DYNLL1P5-201ENST00000467158 270 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AC022784.5-201ENST00000522241 437 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AP005435.4-201ENST00000529514 284 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 DNAJC19P3-201ENST00000594491 331 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AP002906.1-201ENST00000603405 233 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AL450336.1-201ENST00000605180 586 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AL589743.7-201ENST00000612637 233 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 AC008498.1-201ENST00000613012 531 ntBASIC1.42□□□□□ -2.18
TRAV1-1A0A0B4J248 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-492P-201ENST00000363035 104 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 RNA5SP126-201ENST00000365092 109 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-741P-201ENST00000383889 107 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AL109755.1-201ENST00000401791 649 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 SNORD56-201ENST00000413522 71 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 LUZP4P1-201ENST00000415420 344 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AL109913.1-201ENST00000421173 514 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 MTCO3P1-205ENST00000422088 832 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 DPH3P2-201ENST00000422618 250 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC019178.2-201ENST00000423595 505 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 HMGB1P9-201ENST00000429856 646 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 OR10R1P-201ENST00000441524 1141 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 HMGN1P5-201ENST00000448591 263 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AL049874.1-201ENST00000489560 388 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC104090.1-201ENST00000506341 1171 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms