Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC073413.2-201ENST00000604332 360 ntBASIC1.02□□□□□ -2.25
TRAV1-2A0A0B4J238 AC025588.2-201ENST00000604851 466 ntBASIC1.02□□□□□ -2.25
TRAV1-2A0A0B4J238 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV1-2A0A0B4J238 AC018926.3-201ENST00000618841 406 ntBASIC1.02□□□□□ -2.25
TRAV1-2A0A0B4J238 MIR6852-201ENST00000621699 66 ntBASIC1.02□□□□□ -2.25
TRAV1-2A0A0B4J238 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV1-2A0A0B4J238 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV1-2A0A0B4J238 AC008555.8-201ENST00000623602 2168 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 SNORD14B-201ENST00000364533 90 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AL161449.1-201ENST00000414531 1199 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AL353729.1-201ENST00000425044 720 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 MTND4LP10-201ENST00000435146 291 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AL606490.8-201ENST00000441624 319 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 RAB11AP1-201ENST00000442978 646 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 SNORD97-201ENST00000459187 142 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 snoU109.1-201ENST00000459339 135 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU5F-8P-201ENST00000515941 111 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU6-202P-201ENST00000515998 96 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AP005639.2-201ENST00000527592 928 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 SEPT7P9-203ENST00000604116 343 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AC055876.5-201ENST00000605667 259 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AC004775.1-201ENST00000607389 753 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 AC106052.1-201ENST00000608029 497 ntBASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV1-2A0A0B4J238 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AL161722.3-201ENST00000605789 2983 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC002543.1-201ENST00000299783 1954 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU6-1159P-201ENST00000362933 107 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 SNORA51.12-201ENST00000384448 134 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 LINC01347-201ENST00000417964 355 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 FO393419.3-201ENST00000428741 282 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC012497.1-201ENST00000429392 575 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 snoU109.4-201ENST00000458953 143 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC118273.2-201ENST00000532092 465 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 CBX3P7-201ENST00000532876 502 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC023043.2-201ENST00000589678 1026 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC005034.5-201ENST00000604219 466 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 VN1R9P-201ENST00000614184 867 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AP003400.5-201ENST00000624827 617 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 AC097655.1-201ENST00000635075 318 ntBASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
TRAV1-2A0A0B4J238 ZNF702P-202ENST00000434269 1966 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC025263.3-201ENST00000622965 1396 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU6-386P-201ENST00000362650 107 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 RNA5SP125-201ENST00000364843 120 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 SNORA23-201ENST00000365128 182 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 TXNP7-201ENST00000406296 293 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 OR9R1P-201ENST00000412200 877 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 UBE2FP1-201ENST00000416536 447 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 MICF-203ENST00000432679 129 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 FABP5P3-201ENST00000437960 408 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 DNAJC19P8-201ENST00000452887 259 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 RPS20P24-201ENST00000457473 361 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC104164.3-201ENST00000467363 1258 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC087884.1-201ENST00000469738 328 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 VPS26AP1-201ENST00000483197 979 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC092902.1-201ENST00000486999 259 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC147055.4-201ENST00000504399 745 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC098799.1-201ENST00000504752 800 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC116337.1-201ENST00000509680 687 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 OR4P1P-201ENST00000530808 1136 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 MIR4513-201ENST00000581077 86 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC078899.2-201ENST00000595282 212 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC073308.1-201ENST00000623696 305 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AC068057.2-201ENST00000624047 895 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.99□□□□□ -2.25
TRAV1-2A0A0B4J238 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 OR4G2P-202ENST00000641004 1759 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms